RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 MNS1Q8NEH6 495 aa3.36□□□□□ -1.87
USP48-215ENST00000534705 ETNPPLQ8TBG4 499 aa3.36□□□□□ -1.87
USP48-215ENST00000534705 FAM151AQ8WW52 585 aa3.36□□□□□ -1.87
USP48-215ENST00000534705 SGCDQ92629 289 aa3.36□□□□□ -1.87
USP48-215ENST00000534705 CD101Q93033 1021 aa3.36□□□□□ -1.87
USP48-215ENST00000534705 SMARCE1Q969G3 411 aa3.36□□□□□ -1.87
USP48-215ENST00000534705 ABTB1Q969K4 478 aaPredicted RBP3.36□□□□□ -1.87
USP48-215ENST00000534705 INTS12Q96CB8 462 aaKnown RBP3.36□□□□□ -1.87
USP48-215ENST00000534705 VMP1Q96GC9 406 aa3.36□□□□□ -1.87
USP48-215ENST00000534705 CDHR1Q96JP9 859 aa3.36□□□□□ -1.87
USP48-215ENST00000534705 ZMAT2Q96NC0 199 aaKnown RBP3.36□□□□□ -1.87
USP48-215ENST00000534705 FAM210AQ96ND0 272 aa3.36□□□□□ -1.87
USP48-215ENST00000534705 INPP4AQ96PE3 977 aaPredicted RBP3.36□□□□□ -1.87
USP48-215ENST00000534705 ACOX2Q99424 681 aa3.36□□□□□ -1.87
USP48-215ENST00000534705 CENPOQ9BU64 300 aa3.36□□□□□ -1.87
USP48-215ENST00000534705 IDI2Q9BXS1 227 aa3.36□□□□□ -1.87
USP48-215ENST00000534705 TMEM39BQ9GZU3 492 aa3.36□□□□□ -1.87
USP48-215ENST00000534705 MMP28Q9H239 520 aa3.36□□□□□ -1.87
USP48-215ENST00000534705 DCTPP1Q9H773 170 aa3.36□□□□□ -1.87
USP48-215ENST00000534705 KIF9Q9HAQ2 790 aa3.36□□□□□ -1.87
USP48-215ENST00000534705 SCPEP1Q9HB40 452 aa3.36□□□□□ -1.87
USP48-215ENST00000534705 IL1RAPL2Q9NP60 686 aa3.36□□□□□ -1.87
USP48-215ENST00000534705 PIH1D3Q9NQM4 214 aaKnown RBP3.36□□□□□ -1.87
USP48-215ENST00000534705 KRT84Q9NSB2 600 aa3.36□□□□□ -1.87
USP48-215ENST00000534705 PSD3Q9NYI0 1048 aa3.36□□□□□ -1.87
USP48-215ENST00000534705 NFKBIL1Q9UBC1 381 aaPredicted RBP3.36□□□□□ -1.87
USP48-215ENST00000534705 RSPH14Q9UHP6 348 aa3.36□□□□□ -1.87
USP48-215ENST00000534705 MKLN1Q9UL63 735 aa3.36□□□□□ -1.87
USP48-215ENST00000534705 PSAT1Q9Y617 370 aa3.36□□□□□ -1.87
USP48-215ENST00000534705 MROH7-TTC4A0A0A0MT08 1334 aa3.36□□□□□ -1.87
USP48-215ENST00000534705 LOXHD1Q8IVV2 1947 aa3.36□□□□□ -1.87
USP48-215ENST00000534705 DNAH12Q6ZR08 3092 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 A0A1W2PQF6 199 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 ASPDHA6ND91 283 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 PGPEP1LA6NFU8 196 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 TSPY2A6NKD2 308 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 TGFB1I1O43294 461 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 ENTPD3O75355 529 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 DAB1O75553 588 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 RTN3O95197 1032 aaPredicted RBP3.35□□□□□ -1.87
USP48-215ENST00000534705 IPO7O95373 1038 aaKnown RBP3.35□□□□□ -1.87
USP48-215ENST00000534705 TSPY3P0CV98 308 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 TSPY8P0CW00 308 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 CDH1P12830 882 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 ATP1A3P13637 1013 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 H2AFXP16104 143 aaPredicted RBP3.35□□□□□ -1.87
USP48-215ENST00000534705 CDH2P19022 906 aaPredicted RBP3.35□□□□□ -1.87
USP48-215ENST00000534705 ICAM3P32942 547 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 BTDP43251 543 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 FUT6P51993 359 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 GTF2A1P52655 376 aaPredicted RBP3.35□□□□□ -1.87
USP48-215ENST00000534705 ZNF132P52740 706 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 LBX1P52954 281 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 TAS2R38P59533 333 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 EEF1A1P68104 462 aaKnown RBP3.35□□□□□ -1.87
USP48-215ENST00000534705 TSPY1Q01534 308 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 ARL16Q0P5N6 197 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 GRIK2Q13002 908 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 DCTN2Q13561 401 aaKnown RBP3.35□□□□□ -1.87
USP48-215ENST00000534705 KRT32Q14532 448 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 ZNF234Q14588 700 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 ADIPOQQ15848 244 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 MYLK3Q32MK0 819 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 DCST1Q5T197 706 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 EEF1A1P5Q5VTE0 462 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 DUS1LQ6P1R4 473 aaKnown RBP3.35□□□□□ -1.87
USP48-215ENST00000534705 TSSK4Q6SA08 328 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 ENOSF1Q7L5Y1 443 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 KRT74Q7RTS7 529 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 HAPLN4Q86UW8 402 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 SNX32Q86XE0 403 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 NRROSQ86YC3 692 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 ERC1Q8IUD2 1116 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 DIS3L2Q8IYB7 885 aaKnown RBP3.35□□□□□ -1.87
USP48-215ENST00000534705 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.35□□□□□ -1.87
USP48-215ENST00000534705 MAB21L3Q8N8X9 362 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 ARHGEF26Q96DR7 871 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 MMABQ96EY8 250 aaPredicted RBP3.35□□□□□ -1.87
USP48-215ENST00000534705 SPATA17Q96L03 361 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 QRFPRQ96P65 431 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 UHRF2Q96PU4 802 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 NODALQ96S42 347 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 PCGF1Q9BSM1 259 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 MAGIXQ9H6Y5 334 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 DNAJC18Q9H819 358 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 ZWILCHQ9H900 591 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 FBRSL1Q9HCM7 1045 aaKnown RBP3.35□□□□□ -1.87
USP48-215ENST00000534705 TCF7L2Q9NQB0 619 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 ACSS1Q9NUB1 689 aaPredicted RBP3.35□□□□□ -1.87
USP48-215ENST00000534705 ABCF3Q9NUQ8 709 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 RNF186Q9NXI6 227 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 POU2F3Q9UKI9 436 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 PADI1Q9ULC6 663 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 DLGAP4Q9Y2H0 992 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 MAU2Q9Y6X3 613 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 GBF1Q92538 1859 aa3.35□□□□□ -1.87
USP48-215ENST00000534705 FAM237AA0A1B0GTK4 181 aa3.34□□□□□ -1.87
USP48-215ENST00000534705 ATP8B1O43520 1251 aa3.34□□□□□ -1.87
USP48-215ENST00000534705 HCRTR2O43614 444 aa3.34□□□□□ -1.87
USP48-215ENST00000534705 HMMRO75330 724 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms