RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	VEGFD	O43915	354 aa		15.44	■□□□□ 0.06
NCAPD3-213	ENST00000534532	NIPSNAP2	O75323	286 aa		15.44	■□□□□ 0.06
NCAPD3-213	ENST00000534532	PRKCH	P24723	683 aa		15.44	■□□□□ 0.06
NCAPD3-213	ENST00000534532	ARHGAP8	P85298	464 aa		15.44	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SNTA1	Q13424	505 aa		15.44	■□□□□ 0.06
NCAPD3-213	ENST00000534532	MFSD5	Q6N075	450 aa		15.44	■□□□□ 0.06
NCAPD3-213	ENST00000534532	ZNF852	Q6ZMS4	543 aa		15.44	■□□□□ 0.06
NCAPD3-213	ENST00000534532	ZNF783	Q6ZMS7	281 aa		15.44	■□□□□ 0.06
NCAPD3-213	ENST00000534532	AMIGO2	Q86SJ2	522 aa		15.44	■□□□□ 0.06
NCAPD3-213	ENST00000534532	RALGPS2	Q86X27	583 aa	Predicted RBP	15.44	■□□□□ 0.06
NCAPD3-213	ENST00000534532	TRPV3	Q8NET8	790 aa		15.44	■□□□□ 0.06
NCAPD3-213	ENST00000534532	ZNF483	Q8TF39	744 aa	Predicted RBP	15.44	■□□□□ 0.06
NCAPD3-213	ENST00000534532	HBEGF	Q99075	208 aa		15.44	■□□□□ 0.06
NCAPD3-213	ENST00000534532	DUSP26	Q9BV47	211 aa		15.44	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SMURF2	Q9HAU4	748 aa		15.44	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SSR3	Q9UNL2	185 aa		15.44	■□□□□ 0.06
NCAPD3-213	ENST00000534532	DCLK1	O15075	740 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	NDUFS4	O43181	175 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	COCH	O43405	550 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SCEL	O95171	688 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	CYBA	P13498	195 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	CRISP3	P54108	245 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	PDSS1	Q5T2R2	415 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	DCUN1D5	Q9BTE7	237 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	RASSF1	Q9NS23	344 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	TAC3	Q9UHF0	121 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	AGR2	O95994	175 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	CYB5A	P00167	134 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	PCDH1	Q08174	1060 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	EIF4H	Q15056	248 aa	Known RBP	15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	OLFML1	Q6UWY5	402 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	LRRC70	Q7Z2Q7	622 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	ESAM	Q96AP7	390 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	GPR62	Q9BZJ7	368 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	UGT2B11	O75310	529 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	ZNF823	P16415	610 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	OXTR	P30559	389 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	ZNF33A	Q06730	810 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	CCNI	Q14094	377 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	FASTKD3	Q14CZ7	662 aa	Known RBP	15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	MZT2B	Q6NZ67	158 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	PAQR3	Q6TCH7	311 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	TMEM125	Q96AQ2	219 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	CDCA3	Q99618	268 aa	Predicted RBP	15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SGIP1	Q9BQI5	828 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	HMG20A	Q9NP66	347 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SDHAF3	Q9NRP4	125 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	KNDC1	Q76NI1	1749 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	DUOX1	Q9NRD9	1551 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	FAM92A	A1XBS5	289 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	TULP2	O00295	520 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	PGRMC2	O15173	223 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	RPL10	P27635	214 aa	Known RBP	15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	TMEM126B	Q8IUX1	230 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	OR7A2P	Q8NGA2	310 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	DNAJB8	Q8NHS0	232 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	CRELD1	Q96HD1	420 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	PLEKHA1	Q9HB21	404 aa		15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	ZCCHC3	Q9NUD5	404 aa	Known RBP	15.43	■□□□□ 0.06
NCAPD3-213	ENST00000534532	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532		A0A1W2PRB8	838 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	PIP5K1B	O14986	540 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	PRAMEF11	O60813	436 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SASH3	O75995	380 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	METTL18	O95568	372 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	OAS1	P00973	400 aa	Known RBP	15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	AHCY	P23526	432 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	ZNF311	Q5JNZ3	666 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	ANKLE1	Q8NAG6	615 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	AP3S1	Q92572	193 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SH3GL2	Q99962	352 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	HERC2P3	Q9BVR0	1158 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	GATA5	Q9BWX5	397 aa	Predicted RBP	15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	PDP1	Q9P0J1	537 aa	Predicted RBP	15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	IRAK3	Q9Y616	596 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532		A0A0G2JN53	185 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	ADAMDEC1	O15204	470 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	ZNF460	Q14592	562 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SLC51A	Q86UW1	340 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	CNTD1	Q8N815	330 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	RNF31	Q96EP0	1072 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	RETREG1	Q9H6L5	497 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	PHF11	Q9UIL8	331 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532		U3KQV3	271 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	OR51F1	A6NGY5	319 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	COQ9	O75208	318 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	ALPP	P05187	535 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SEPHS1	P49903	392 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	GDF10	P55107	478 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	LIN54	Q6MZP7	749 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SLC30A6	Q6NXT4	461 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SLC39A4	Q6P5W5	647 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SLC30A8	Q8IWU4	369 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	HM13	Q8TCT9	377 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	GINS4	Q9BRT9	223 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	EPB41L1	Q9H4G0	881 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SLC32A1	Q9H598	525 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	EHD3	Q9NZN3	535 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	CFAP20	Q9Y6A4	193 aa	Known RBP	15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	AKAP8	O43823	692 aa	Known RBP	15.42	■□□□□ 0.06

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms