RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 GKN1Q9NS71 199 aa4.52□□□□□ -1.69
ECHDC1-223ENST00000534442 SEPT10Q9P0V9 454 aa4.52□□□□□ -1.69
ECHDC1-223ENST00000534442 SEL1LQ9UBV2 794 aa4.52□□□□□ -1.69
ECHDC1-223ENST00000534442 MKLN1Q9UL63 735 aa4.52□□□□□ -1.69
ECHDC1-223ENST00000534442 ADAM18Q9Y3Q7 739 aa4.52□□□□□ -1.69
ECHDC1-223ENST00000534442 TTLL3Q9Y4R7 772 aa4.52□□□□□ -1.69
ECHDC1-223ENST00000534442 SLCO1B1Q9Y6L6 691 aa4.52□□□□□ -1.69
ECHDC1-223ENST00000534442 ANK1P16157 1881 aa4.52□□□□□ -1.69
ECHDC1-223ENST00000534442 LOC100653049A0A140TA62 436 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 SMIM35A0A1B0GVV1 85 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 hCG_1807616A0A1W2PRN6 198 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 C2CD4BA6NLJ0 364 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 FAM157AC9JC47 383 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 K7EQS6 105 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 KRT34O76011 436 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 REC8O95072 547 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 KLF8O95600 359 aaPredicted RBP4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 IL1AP01583 271 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 GABRG2P18507 467 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 TFEBP19484 476 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 TACR2P21452 398 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 IL4RP24394 825 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 ACP1P24666 158 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 GARSP41250 739 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 SLC1A4P43007 532 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 TUBA4AP68366 448 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 MC1RQ01726 317 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 CEBPZQ03701 1054 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 INPP5JQ15735 1006 aaPredicted RBP4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 ISXQ2M1V0 245 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 EDRF1Q3B7T1 1238 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 KRTAP24-1Q3LI83 254 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 TMEM119Q4V9L6 283 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 SYTL3Q4VX76 610 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 VWA2Q5GFL6 755 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 EARS2Q5JPH6 523 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 STXBP5Q5T5C0 1151 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 ARHGEF16Q5VV41 709 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 ATG9BQ674R7 924 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 TXNDC8Q6A555 127 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 FCRLBQ6BAA4 426 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 SUMO4Q6EEV6 95 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 FUT10Q6P4F1 479 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 PODNL1Q6PEZ8 512 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 NCEH1Q6PIU2 408 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 ZNF813Q6ZN06 617 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 ASB18Q6ZVZ8 466 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 SZRD1Q7Z422 152 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 GPAT4Q86UL3 456 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 AMER2Q8N7J2 671 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 LSMEM1Q8N8F7 131 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 FAM98AQ8NCA5 519 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 OR4N2Q8NGD1 307 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 URGCPQ8TCY9 931 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 SDR42E1Q8WUS8 393 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 FAM120BQ96EK7 910 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 C14orf79Q96F83 325 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 PIMREGQ9BSJ6 248 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 IFT27Q9BW83 186 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 STRA6Q9BX79 667 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 CRNKL1Q9BZJ0 848 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 CDT1Q9H211 546 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 CHST11Q9NPF2 352 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 NCKIPSDQ9NZQ3 722 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 NFE2L3Q9Y4A8 694 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 PCDHGB5Q9Y5G0 923 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 KLF2Q9Y5W3 355 aaPredicted RBP4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 DOCK5Q9H7D0 1870 aa4.51□□□□□ -1.69
ECHDC1-223ENST00000534442 LRP4O75096 1905 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 TRBV5-7A0A0A0MS05 114 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 A0A1B0GTQ1 180 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 LRRC3CA6NJW4 275 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 KCNN4O15554 427 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 LRRTM2O43300 516 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 PAGE4O60829 102 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 RAMP2O60895 175 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 ZNF217O75362 1048 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 IDH1O75874 414 aaKnown RBP4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 PGM3O95394 542 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 PRAMEF12O95522 483 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 EIF2S1P05198 315 aaKnown RBP4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 ZNF8P17098 575 aaPredicted RBP4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 ACSL1P33121 698 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 COL10A1Q03692 680 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 SLC18A2Q05940 514 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 TFCP2Q12800 502 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 ART3Q13508 389 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 RNPS1Q15287 305 aaKnown RBP4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 TAF11Q15544 211 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 CEBPEQ15744 281 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 PSMD5Q16401 504 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 GSTA3Q16772 222 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 RILPL1Q5EBL4 403 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 KCNT1Q5JUK3 1230 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 FBXO42Q6P3S6 717 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 METTL7BQ6UX53 244 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 MRGPRGQ86SM5 289 aa4.5□□□□□ -1.69
ECHDC1-223ENST00000534442 CCDC25Q86WR0 208 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms