RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	KRT13	P13646	458 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	PFKFB1	P16118	471 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	GJA1	P17302	382 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	GNLY	P22749	145 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	DNASE1	P24855	282 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	CD27	P26842	260 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	CDC25C	P30307	473 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	SOAT1	P35610	550 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	ARFIP1	P53367	373 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	SIRPA	P78324	504 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	KCNJ10	P78508	379 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	TRADD	Q15628	312 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	HSPB2	Q16082	182 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	VWC2	Q2TAL6	325 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	ATP13A5	Q4VNC0	1218 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	HSP90AB3P	Q58FF7	597 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	HIST2H2BC	Q6DN03	193 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	HIST2H2BD	Q6DRA6	164 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	NADSYN1	Q6IA69	706 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	TEX38	Q6PEX7	206 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979		Q6ZSV7	163 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	C11orf57	Q6ZUT1	292 aa	Predicted RBP	4.55	□□□□□ -1.68
ATM-223	ENST00000533979	MIER3	Q7Z3K6	550 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	WDR5B	Q86VZ2	330 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	ZNF595	Q8IYB9	648 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	CLYBL	Q8N0X4	340 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	ZCCHC9	Q8N567	271 aa	Known RBP	4.55	□□□□□ -1.68
ATM-223	ENST00000533979	TEX45	Q8NA69	505 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	OR4N2	Q8NGD1	307 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	OR8K5	Q8NH50	307 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	RASSF8	Q8NHQ8	419 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	SPATA3	Q8NHX4	192 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	C9orf43	Q8TAL5	461 aa	Predicted RBP	4.55	□□□□□ -1.68
ATM-223	ENST00000533979	IGSF8	Q969P0	613 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	HNRNPAB	Q99729	332 aa	Known RBP	4.55	□□□□□ -1.68
ATM-223	ENST00000533979	KCNK15	Q9H427	330 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	SLC28A3	Q9HAS3	691 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	BPIFA1	Q9NP55	256 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	MTMR10	Q9NXD2	777 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	TRPC4	Q9UBN4	977 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	TSPYL4	Q9UJ04	414 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	ITGA11	Q9UKX5	1188 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	STX8	Q9UNK0	236 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	PROCR	Q9UNN8	238 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	EXOC7	Q9UPT5	735 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	RAI2	Q9Y5P3	530 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	TEX264	Q9Y6I9	313 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	CEPT1	Q9Y6K0	416 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	4.55	□□□□□ -1.68
ATM-223	ENST00000533979	TIAM1	Q13009	1591 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	SAMD9L	Q8IVG5	1584 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	ARHGAP5	Q13017	1502 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	EHBP1L1	Q8N3D4	1523 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	KIDINS220	Q9ULH0	1771 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	MED14	O60244	1454 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	TNS2	Q63HR2	1409 aa		4.55	□□□□□ -1.68
ATM-223	ENST00000533979	IQGAP1	P46940	1657 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	DIP2C	Q9Y2E4	1556 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979		A0A0B4J293	547 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	C5orf52	A6NGY3	159 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	KLRF2	D3W0D1	207 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	ZBTB43	O43298	467 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	JRK	O75564	520 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	PRSS2	P07478	247 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	VPREB1	P12018	145 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	EPOR	P19235	508 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	ITIH1	P19827	911 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	MYF6	P23409	242 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	PRPH	P41219	470 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	CENPA	P49450	140 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	GMFB	P60983	142 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	INA	Q16352	499 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	HSP90AA5P	Q58FG0	334 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	MDH1B	Q5I0G3	518 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	KCNT1	Q5JUK3	1230 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	ISLR2	Q6UXK2	745 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	TMEM110	Q86TL2	294 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	NOXA1	Q86UR1	476 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	CLIP4	Q8N3C7	705 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	HORMAD2	Q8N7B1	307 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	LRRC57	Q8N9N7	239 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	UXS1	Q8NBZ7	420 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	DENND6B	Q8NEG7	585 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	HUS1B	Q8NHY5	278 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	SLC35F5	Q8WV83	523 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	ROBO4	Q8WZ75	1007 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	SPSB1	Q96BD6	273 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	SPACA9	Q96E40	222 aa	Predicted RBP	4.54	□□□□□ -1.68
ATM-223	ENST00000533979	SLITRK1	Q96PX8	696 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	MXRA8	Q9BRK3	442 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	KATNB1	Q9BVA0	655 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	TM6SF1	Q9BZW5	370 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	NYX	Q9GZU5	481 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	NT5C3A	Q9H0P0	336 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	PPIL3	Q9H2H8	161 aa	Known RBP	4.54	□□□□□ -1.68
ATM-223	ENST00000533979	PRMT8	Q9NR22	394 aa	Predicted RBP	4.54	□□□□□ -1.68
ATM-223	ENST00000533979	POLE3	Q9NRF9	147 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	PRMT7	Q9NVM4	692 aa	Predicted RBP	4.54	□□□□□ -1.68
ATM-223	ENST00000533979	COMMD8	Q9NX08	183 aa		4.54	□□□□□ -1.68
ATM-223	ENST00000533979	VPS18	Q9P253	973 aa		4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms