RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 SAMSN1Q9NSI8 373 aaKnown RBP8.54□□□□□ -1.04
PACS1-213ENST00000533756 DTLQ9NZJ0 730 aa8.54□□□□□ -1.04
PACS1-213ENST00000533756 ALG6Q9Y672 507 aa8.54□□□□□ -1.04
PACS1-213ENST00000533756 COLEC10Q9Y6Z7 277 aa8.54□□□□□ -1.04
PACS1-213ENST00000533756 A0A1B0GTH9 108 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 A0A1B0GX78 115 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 GTPBP10A4D1E9 387 aaKnown RBP8.53□□□□□ -1.04
PACS1-213ENST00000533756 CES2O00748 559 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 HCRTR1O43613 425 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 CNOT4O95628 575 aaKnown RBP8.53□□□□□ -1.04
PACS1-213ENST00000533756 CD46P15529 392 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 CYP11B1P15538 503 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 ZNF24P17028 368 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 MX2P20592 715 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 GCGRP47871 477 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 ZNF33BQ06732 778 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 SNTB1Q13884 538 aaKnown RBP8.53□□□□□ -1.04
PACS1-213ENST00000533756 CHRFAM7AQ494W8 412 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 FILIP1LQ4L180 1135 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 ANKRD20A8PQ5CZ79 823 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 HIST2H2BDQ6DRA6 164 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 ARHGAP36Q6ZRI8 547 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 COX15Q7KZN9 410 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 TRAPPC5Q8IUR0 188 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 TMTC1Q8IUR5 882 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 TRAM1L1Q8N609 369 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 MSANTD4Q8NCY6 345 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 GPT2Q8TD30 523 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 FAM172AQ8WUF8 416 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 INSM2Q96T92 566 aaPredicted RBP8.53□□□□□ -1.04
PACS1-213ENST00000533756 MESP1Q9BRJ9 268 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 SPATA16Q9BXB7 569 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 METTL5Q9NRN9 209 aaKnown RBP8.53□□□□□ -1.04
PACS1-213ENST00000533756 RIC8BQ9NVN3 520 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 IL1RAPL1Q9NZN1 696 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 GNPTGQ9UJJ9 305 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 DNMT3AQ9Y6K1 912 aaPredicted RBP8.53□□□□□ -1.04
PACS1-213ENST00000533756 CPAMD8Q8IZJ3 1885 aa8.53□□□□□ -1.04
PACS1-213ENST00000533756 C1orf232A0A0U1RR37 186 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 C2CD4BA6NLJ0 364 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 C2orf74A8MZ97 194 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 DFFAO00273 331 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 TLX2O43763 284 aaPredicted RBP8.52□□□□□ -1.05
PACS1-213ENST00000533756 MTX2O75431 263 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 PEX11BO96011 259 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 FAM157CP0CG43 387 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 EPXP11678 715 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 SYT1P21579 422 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 PTGER1P34995 402 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 DCDC1P59894 354 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 TPI1P60174 286 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 RPL26P61254 145 aaKnown RBP8.52□□□□□ -1.05
PACS1-213ENST00000533756 TMPRSS15P98073 1019 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 GTF2H3Q13889 308 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 C2CD6Q53TS8 623 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 METRNLQ641Q3 311 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 TTLL10Q6ZVT0 673 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.52□□□□□ -1.05
PACS1-213ENST00000533756 MCATQ8IVS2 390 aaKnown RBP8.52□□□□□ -1.05
PACS1-213ENST00000533756 VWA5B2Q8N398 1253 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 RPRMLQ8N4K4 120 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 C19orf47Q8N9M1 422 aaKnown RBP8.52□□□□□ -1.05
PACS1-213ENST00000533756 ACVR1CQ8NER5 493 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 OR10Q1Q8NGQ4 319 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 ROBO4Q8WZ75 1007 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 C8orf44Q96CB5 159 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 ZNF396Q96N95 335 aaPredicted RBP8.52□□□□□ -1.05
PACS1-213ENST00000533756 SIGLEC12Q96PQ1 595 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 OLFM1Q99784 485 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 NUP85Q9BW27 656 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 PDCL3Q9H2J4 239 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 SRMSQ9H3Y6 488 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 KLHL1Q9NR64 748 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 RAD18Q9NS91 495 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 APEX2Q9UBZ4 518 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 FZD10Q9ULW2 581 aa8.52□□□□□ -1.05
PACS1-213ENST00000533756 RPL26L1Q9UNX3 145 aaKnown RBP8.52□□□□□ -1.05
PACS1-213ENST00000533756 CFAP20Q9Y6A4 193 aaKnown RBP8.52□□□□□ -1.05
PACS1-213ENST00000533756 IGHV1-45A0A0A0MS14 117 aa8.51□□□□□ -1.05
PACS1-213ENST00000533756 BTN3A3O00478 584 aa8.51□□□□□ -1.05
PACS1-213ENST00000533756 DNAJB6O75190 326 aa8.51□□□□□ -1.05
PACS1-213ENST00000533756 POP7O75817 140 aaKnown RBP8.51□□□□□ -1.05
PACS1-213ENST00000533756 CTSBP07858 339 aa8.51□□□□□ -1.05
PACS1-213ENST00000533756 ITGAMP11215 1152 aa8.51□□□□□ -1.05
PACS1-213ENST00000533756 CXCR2P25025 360 aa8.51□□□□□ -1.05
PACS1-213ENST00000533756 THBS2P35442 1172 aa8.51□□□□□ -1.05
PACS1-213ENST00000533756 LRRC63Q05C16 580 aa8.51□□□□□ -1.05
PACS1-213ENST00000533756 KLC1Q07866 573 aa8.51□□□□□ -1.05
PACS1-213ENST00000533756 TMEM115Q12893 351 aaPredicted RBP8.51□□□□□ -1.05
PACS1-213ENST00000533756 TUBA3CQ13748 450 aa8.51□□□□□ -1.05
PACS1-213ENST00000533756 OR1C1Q15619 314 aa8.51□□□□□ -1.05
PACS1-213ENST00000533756 DEFB110Q30KQ9 67 aa8.51□□□□□ -1.05
PACS1-213ENST00000533756 RNFT1Q5M7Z0 435 aa8.51□□□□□ -1.05
PACS1-213ENST00000533756 GPRC6AQ5T6X5 926 aa8.51□□□□□ -1.05
PACS1-213ENST00000533756 YOD1Q5VVQ6 348 aaPredicted RBP8.51□□□□□ -1.05
PACS1-213ENST00000533756 KIAA0930Q6ICG6 404 aaPredicted RBP8.51□□□□□ -1.05
PACS1-213ENST00000533756 TUBA3EQ6PEY2 450 aa8.51□□□□□ -1.05
PACS1-213ENST00000533756 FAM83HQ6ZRV2 1179 aaPredicted RBP8.51□□□□□ -1.05
PACS1-213ENST00000533756 NEK10Q6ZWH5 1172 aa8.51□□□□□ -1.05
PACS1-213ENST00000533756 NLRP9Q7RTR0 991 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms