RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 C17orf50Q8WW18 174 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 TEFMQ96QE5 360 aaKnown RBP11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 ZIC5Q96T25 663 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 WDR12Q9GZL7 423 aaKnown RBP11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 CLK4Q9HAZ1 481 aaKnown RBP11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 H3BQ06 376 aaPredicted RBP11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 K7EPI3 171 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 ANXA4P09525 319 aaPredicted RBP11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 SLC6A2P23975 617 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 MPP1Q00013 466 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 C2orf80Q0P641 193 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 CST6Q15828 149 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 HSF5Q4G112 596 aaPredicted RBP11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 MARCH8Q5T0T0 291 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 GALNT18Q6P9A2 607 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 DCP2Q8IU60 420 aaKnown RBP11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 RASSF5Q8WWW0 418 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 TFGQ92734 400 aaPredicted RBP11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 ZHX1-C8orf76Q96EF9 292 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 C17orf62Q9BQA9 187 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 MRPL39Q9NYK5 338 aaKnown RBP11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 ERVK-11Q9UQG0 969 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 BTRCQ9Y297 605 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 SHOX2O60902 331 aaPredicted RBP11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 BANF1O75531 89 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 FESP07332 822 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 ITPKBP27987 946 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 HSPA7P48741 367 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 NRG3P56975 720 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 SLC25A11Q02978 314 aaKnown RBP11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 QPCTQ16769 361 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 FAM214AQ32MH5 1076 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 AKAP14Q86UN6 197 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 GALNT15Q8N3T1 639 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 ZNF366Q8N895 744 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 SIDT2Q8NBJ9 832 aaKnown RBP11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 SLCO2A1Q92959 643 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 APOLD1Q96LR9 279 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 MCMBPQ9BTE3 642 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 GPR174Q9BXC1 333 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 LMAN1LQ9HAT1 526 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 CRNNQ9UBG3 495 aaPredicted RBP11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 ANAPC2Q9UJX6 822 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 TIAM2Q8IVF5 1701 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 AREL1O15033 823 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 SLC28A2O43868 658 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 LYPLA1O75608 230 aaPredicted RBP11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 LEFTY1O75610 366 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 MATN4O95460 622 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 OAS1P00973 400 aaKnown RBP11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 RABIFP47224 123 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 CLCQ05315 142 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 KCNC3Q14003 757 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 NUDT13Q86X67 352 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 TDRPQ86YL5 185 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 FSTL5Q8N475 847 aaPredicted RBP11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 TXNDC5Q8NBS9 432 aaKnown RBP11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 DNAJB8Q8NHS0 232 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 ZNF563Q8TA94 476 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 MAGEE2Q8TD90 523 aaPredicted RBP11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 BORCS6Q96GS4 357 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 COX4I2Q96KJ9 171 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 RIBC2Q9H4K1 309 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 PAPPAQ13219 1627 aa11.06□□□□□ -0.64
AMBRA1-211ENST00000533727 TOGARAM1Q9Y4F4 1720 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 LOC100506127A0A0U1RQW1 187 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 H3BN98 237 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 TK2O00142 265 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 TRMUO75648 421 aaKnown RBP11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 SEMA4FO95754 770 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 HOXA9P31269 272 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 SLC26A3P40879 764 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 MRPS21P82921 87 aaKnown RBP11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 PON2Q15165 354 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 TCEAL5Q5H9L2 206 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 ADGRD1Q6QNK2 874 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 CAB39LQ9H9S4 337 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 ARL5AQ9Y689 179 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 C2orf78A6NCI8 922 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 DUX1O43812 170 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 TULP3O75386 442 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 IL1R2P27930 398 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 LGALS3BPQ08380 585 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 TRAP1Q12931 704 aaKnown RBP11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 TSNQ15631 228 aaKnown RBP11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 ASTE1Q2TB18 679 aaPredicted RBP11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 PLEKHS1Q5SXH7 462 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 CDC73Q6P1J9 531 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 TRPV3Q8NET8 790 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 CENPIQ92674 756 aaPredicted RBP11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 NXNL1Q96CM4 212 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 TBCDQ9BTW9 1192 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 THUMPD1Q9NXG2 353 aaKnown RBP11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 PHF11Q9UIL8 331 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 CNTN6Q9UQ52 1028 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 PLLPQ9Y342 182 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 POLR3HQ9Y535 204 aaPredicted RBP11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 STON1Q9Y6Q2 735 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 A0A0U1RQJ8 604 aa11.05□□□□□ -0.64
AMBRA1-211ENST00000533727 NPHS1O60500 1241 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms