RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 NDOR1Q9UHB4 597 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 YIPF1Q9Y548 306 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 KNTC1P50748 2209 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 UPK3BL1B0FP48 263 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 UPK3BL2E5RIL1 263 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 SLC9A3R1O14745 358 aaPredicted RBP12.01□□□□□ -0.49
BDNF-218ENST00000533246 GABRDO14764 452 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 KMOO15229 486 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 CNMDO75829 334 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 CHRNA1P02708 482 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 SLC35G4P0C7Q5 338 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 IGFBP4P22692 258 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 MAT2AP31153 395 aaKnown RBP12.01□□□□□ -0.49
BDNF-218ENST00000533246 GPAT3Q53EU6 434 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 SPANXN2Q5MJ10 180 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 INTS11Q5TA45 600 aaKnown RBP12.01□□□□□ -0.49
BDNF-218ENST00000533246 SVOPQ8N4V2 548 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 ENDOVQ8N8Q3 282 aaKnown RBP12.01□□□□□ -0.49
BDNF-218ENST00000533246 SMG7Q92540 1137 aaKnown RBP12.01□□□□□ -0.49
BDNF-218ENST00000533246 RELTQ969Z4 430 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 MED30Q96HR3 178 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 ZBED3Q96IU2 234 aaPredicted RBP12.01□□□□□ -0.49
BDNF-218ENST00000533246 MFSD1Q9H3U5 465 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 KLHL1Q9NR64 748 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 ENTPD4Q9Y227 616 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 TBC1D3DA0A087WVF3 549 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 TBC1D3IA0A087WXS9 549 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 TBC1D3EA0A087X179 549 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 TBC1D3KA0A087X1G2 549 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 TBC1D3FA6NER0 549 aaPredicted RBP12.01□□□□□ -0.49
BDNF-218ENST00000533246 TBC1D3LB9A6J9 549 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 FPGTO14772 594 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 SEC24AO95486 1093 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 FADS2O95864 444 aaKnown RBP12.01□□□□□ -0.49
BDNF-218ENST00000533246 GBAP04062 536 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 TBC1D3HP0C7X1 549 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 SLC35E2BP0CK96 405 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 GLDCP23378 1020 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 HTR7P34969 479 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 PPM1AP35813 382 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 TBC1D3GQ6DHY5 549 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 TBC1D3CQ6IPX1 549 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 DPY19L2P1Q6NXN4 242 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 TBC1D3Q8IZP1 549 aaPredicted RBP12.01□□□□□ -0.49
BDNF-218ENST00000533246 KRT78Q8N1N4 520 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 KREMEN2Q8NCW0 462 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 SH3RF2Q8TEC5 729 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 SOX17Q9H6I2 414 aaPredicted RBP12.01□□□□□ -0.49
BDNF-218ENST00000533246 OSER1Q9NX31 292 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 POU2F3Q9UKI9 436 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 TPST2O60704 377 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 T-ENOLP0DO92 83 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 SSR2P43308 183 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 SEPHS1P49903 392 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 LAPTM5Q13571 262 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 EIF3MQ7L2H7 374 aaKnown RBP12.01□□□□□ -0.49
BDNF-218ENST00000533246 TMEM135Q86UB9 458 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 C3orf58Q8NDZ4 430 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 OR4A15Q8NGL6 344 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 SLC13A3Q8WWT9 602 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 LRRC58Q96CX6 371 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 RNFT2Q96EX2 444 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 ZNF221Q9UK13 617 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 SLC22A14Q9Y267 594 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 TESMINQ9Y4I5 508 aa12.01□□□□□ -0.49
BDNF-218ENST00000533246 CFAP20Q9Y6A4 193 aaKnown RBP12.01□□□□□ -0.49
BDNF-218ENST00000533246 GRM6O15303 877 aa12□□□□□ -0.49
BDNF-218ENST00000533246 IL6P05231 212 aa12□□□□□ -0.49
BDNF-218ENST00000533246 THRBP10828 461 aa12□□□□□ -0.49
BDNF-218ENST00000533246 ILF2Q12905 390 aaKnown RBP12□□□□□ -0.49
BDNF-218ENST00000533246 GNA13Q14344 377 aa12□□□□□ -0.49
BDNF-218ENST00000533246 TIFABQ6ZNK6 161 aa12□□□□□ -0.49
BDNF-218ENST00000533246 GRPEL2Q8TAA5 225 aa12□□□□□ -0.49
BDNF-218ENST00000533246 CENPIQ92674 756 aaPredicted RBP12□□□□□ -0.49
BDNF-218ENST00000533246 EXOSC8Q96B26 276 aaKnown RBP12□□□□□ -0.49
BDNF-218ENST00000533246 ZHX1-C8orf76Q96EF9 292 aa12□□□□□ -0.49
BDNF-218ENST00000533246 MRGPRX2Q96LB1 330 aa12□□□□□ -0.49
BDNF-218ENST00000533246 NENFQ9UMX5 172 aa12□□□□□ -0.49
BDNF-218ENST00000533246 DNAJC25-GNG10A0A024R161 153 aa12□□□□□ -0.49
BDNF-218ENST00000533246 PIPSLA2A3N6 862 aa12□□□□□ -0.49
BDNF-218ENST00000533246 CENPBD1B2RD01 187 aa12□□□□□ -0.49
BDNF-218ENST00000533246 MED26O95402 600 aa12□□□□□ -0.49
BDNF-218ENST00000533246 CLTBP09497 229 aa12□□□□□ -0.49
BDNF-218ENST00000533246 OGNP20774 298 aaKnown RBP12□□□□□ -0.49
BDNF-218ENST00000533246 PRKACGP22612 351 aa12□□□□□ -0.49
BDNF-218ENST00000533246 AP1S1P61966 158 aa12□□□□□ -0.49
BDNF-218ENST00000533246 DGUOKQ16854 277 aa12□□□□□ -0.49
BDNF-218ENST00000533246 AHSA2Q719I0 299 aa12□□□□□ -0.49
BDNF-218ENST00000533246 ARMC8Q8IUR7 673 aa12□□□□□ -0.49
BDNF-218ENST00000533246 RASSF5Q8WWW0 418 aa12□□□□□ -0.49
BDNF-218ENST00000533246 ZBTB26Q9HCK0 441 aa12□□□□□ -0.49
BDNF-218ENST00000533246 DPP7Q9UHL4 492 aa12□□□□□ -0.49
BDNF-218ENST00000533246 LTBP3Q9NS15 1303 aa12□□□□□ -0.49
BDNF-218ENST00000533246 ZBTB42B2RXF5 422 aa12□□□□□ -0.49
BDNF-218ENST00000533246 SLC31A1O15431 190 aa12□□□□□ -0.49
BDNF-218ENST00000533246 POP4O95707 220 aaKnown RBP12□□□□□ -0.49
BDNF-218ENST00000533246 STATHP02808 62 aa12□□□□□ -0.49
BDNF-218ENST00000533246 PAICSP22234 425 aaKnown RBP12□□□□□ -0.49
BDNF-218ENST00000533246 GSK3BP49841 420 aa12□□□□□ -0.49
BDNF-218ENST00000533246 PLA2G16P53816 162 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms