RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 SBSNQ6UWP8 590 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 AMZ2Q86W34 360 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 OR2L2Q8NH16 312 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 ESAMQ96AP7 390 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 TM9SF3Q9HD45 589 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 TCF7L2Q9NQB0 619 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 VTI1BQ9UEU0 232 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 GPSM3Q9Y4H4 160 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 ASB1Q9Y576 335 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 FRYLO94915 3013 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 TOR1BO14657 336 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 KMOO15229 486 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 GPC4O75487 556 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 ACP5P13686 325 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 NQO1P15559 274 aaKnown RBP18.06■□□□□ 0.48
SMPD1-208ENST00000533123 NCF2P19878 526 aaPredicted RBP18.06■□□□□ 0.48
SMPD1-208ENST00000533123 ITPKAP23677 461 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 CD38P28907 300 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 CPA2P48052 419 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 RGS4P49798 205 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 RACK1P63244 317 aaKnown RBP18.06■□□□□ 0.48
SMPD1-208ENST00000533123 SH3BP2P78314 561 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 ANGPT1Q15389 498 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 ZNF658BQ4V348 819 aaPredicted RBP18.06■□□□□ 0.48
SMPD1-208ENST00000533123 SYTL3Q4VX76 610 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 PLEKHS1Q5SXH7 462 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 CLEC6AQ6EIG7 209 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 GALNT13Q8IUC8 556 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 C1orf216Q8TAB5 229 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 SKA2Q8WVK7 121 aaPredicted RBP18.06■□□□□ 0.48
SMPD1-208ENST00000533123 DNASE2BQ8WZ79 361 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 SCARF2Q96GP6 870 aaPredicted RBP18.06■□□□□ 0.48
SMPD1-208ENST00000533123 PDLIM5Q96HC4 596 aaKnown RBP18.06■□□□□ 0.48
SMPD1-208ENST00000533123 RMI1Q9H9A7 625 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 KLHL42Q9P2K6 505 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 KLQ9UEF7 1012 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 ADAMTS6Q9UKP5 1117 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 PLEKHM1Q9Y4G2 1056 aa18.06■□□□□ 0.48
SMPD1-208ENST00000533123 MGAT4DA6NG13 374 aa18.05■□□□□ 0.48
SMPD1-208ENST00000533123 SLCO1B7G3V0H7 640 aa18.05■□□□□ 0.48
SMPD1-208ENST00000533123 KLK8O60259 260 aa18.05■□□□□ 0.48
SMPD1-208ENST00000533123 KRT16P08779 473 aa18.05■□□□□ 0.48
SMPD1-208ENST00000533123 PDHA2P29803 388 aa18.05■□□□□ 0.48
SMPD1-208ENST00000533123 DHPSP49366 369 aaPredicted RBP18.05■□□□□ 0.48
SMPD1-208ENST00000533123 ELF3P78545 371 aaPredicted RBP18.05■□□□□ 0.48
SMPD1-208ENST00000533123 GBX1Q14549 363 aa18.05■□□□□ 0.48
SMPD1-208ENST00000533123 TCEA2Q15560 299 aa18.05■□□□□ 0.48
SMPD1-208ENST00000533123 TGFBIQ15582 683 aa18.05■□□□□ 0.48
SMPD1-208ENST00000533123 LSM12Q3MHD2 195 aaKnown RBP18.05■□□□□ 0.48
SMPD1-208ENST00000533123 XKR5Q6UX68 686 aa18.05■□□□□ 0.48
SMPD1-208ENST00000533123 TRPC4APQ8TEL6 797 aa18.05■□□□□ 0.48
SMPD1-208ENST00000533123 TMEM159Q96B96 161 aa18.05■□□□□ 0.48
SMPD1-208ENST00000533123 TRMOQ9BU70 441 aa18.05■□□□□ 0.48
SMPD1-208ENST00000533123 CD274Q9NZQ7 290 aa18.05■□□□□ 0.48
SMPD1-208ENST00000533123 WDR87Q6ZQQ6 2873 aa18.05■□□□□ 0.48
SMPD1-208ENST00000533123 SPTY2D1-AS1A0A0U1RR47 76 aa18.04■□□□□ 0.48
SMPD1-208ENST00000533123 A0A1B0GTL3 188 aa18.04■□□□□ 0.48
SMPD1-208ENST00000533123 C17orf113A0A1B0GUU1 675 aa18.04■□□□□ 0.48
SMPD1-208ENST00000533123 A0A1W2PR77 199 aa18.04■□□□□ 0.48
SMPD1-208ENST00000533123 SLC5A10A0PJK1 596 aa18.04■□□□□ 0.48
SMPD1-208ENST00000533123 CFAP73A6NFT4 308 aa18.04■□□□□ 0.48
SMPD1-208ENST00000533123 SNUPNO95149 360 aaKnown RBP18.04■□□□□ 0.48
SMPD1-208ENST00000533123 SRP54P61011 504 aaKnown RBP18.04■□□□□ 0.48
SMPD1-208ENST00000533123 GALNT1Q10472 559 aaPredicted RBP18.04■□□□□ 0.48
SMPD1-208ENST00000533123 PTK2BQ14289 1009 aa18.04■□□□□ 0.48
SMPD1-208ENST00000533123 ALG11Q2TAA5 492 aa18.04■□□□□ 0.48
SMPD1-208ENST00000533123 C18orf21Q32NC0 220 aaPredicted RBP18.04■□□□□ 0.48
SMPD1-208ENST00000533123 ZNF542PQ5EBM4 170 aa18.04■□□□□ 0.48
SMPD1-208ENST00000533123 WDR45BQ5MNZ6 344 aa18.04■□□□□ 0.48
SMPD1-208ENST00000533123 PMS2CLQ68D20 193 aa18.04■□□□□ 0.48
SMPD1-208ENST00000533123 CYHR1Q6ZMK1 362 aa18.04■□□□□ 0.48
SMPD1-208ENST00000533123 FAM83HQ6ZRV2 1179 aaPredicted RBP18.04■□□□□ 0.48
SMPD1-208ENST00000533123 MYO1HQ8N1T3 1032 aa18.04■□□□□ 0.48
SMPD1-208ENST00000533123 MFSD2AQ8NA29 543 aa18.04■□□□□ 0.48
SMPD1-208ENST00000533123 GPR27Q9NS67 375 aa18.04■□□□□ 0.48
SMPD1-208ENST00000533123 LNPEPQ9UIQ6 1025 aa18.04■□□□□ 0.48
SMPD1-208ENST00000533123 SNX2O60749 519 aa18.04■□□□□ 0.48
SMPD1-208ENST00000533123 SLCO2B1O94956 709 aa18.04■□□□□ 0.48
SMPD1-208ENST00000533123 RPS17P08708 135 aaKnown RBP18.04■□□□□ 0.48
SMPD1-208ENST00000533123 SP9P0CG40 484 aa18.04■□□□□ 0.48
SMPD1-208ENST00000533123 BTKQ06187 659 aa18.04■□□□□ 0.48
SMPD1-208ENST00000533123 FRA10AC1Q70Z53 315 aa18.04■□□□□ 0.48
SMPD1-208ENST00000533123 HID1Q8IV36 788 aa18.04■□□□□ 0.48
SMPD1-208ENST00000533123 NELL1Q92832 810 aa18.04■□□□□ 0.48
SMPD1-208ENST00000533123 COL25A1Q9BXS0 654 aaPredicted RBP18.04■□□□□ 0.48
SMPD1-208ENST00000533123 MID1IP1Q9NPA3 183 aa18.04■□□□□ 0.48
SMPD1-208ENST00000533123 SEMA4BQ9NPR2 832 aaPredicted RBP18.04■□□□□ 0.48
SMPD1-208ENST00000533123 TRAF6Q9Y4K3 522 aa18.04■□□□□ 0.48
SMPD1-208ENST00000533123 DNMT3AQ9Y6K1 912 aaPredicted RBP18.04■□□□□ 0.48
SMPD1-208ENST00000533123 TNFRSF10CO14798 259 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 CBSLP0DN79 551 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 ESRRAP11474 423 aaPredicted RBP18.03■□□□□ 0.48
SMPD1-208ENST00000533123 CALB2P22676 271 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 CBSP35520 551 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 FZD2Q14332 565 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 PPP1R3AQ16821 1122 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 PLK5Q496M5 336 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 LYSMD4Q5XG99 296 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 TMEM198Q66K66 360 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 OXR1Q8N573 874 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms