RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 KLKB1P03952 638 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 BPIP17213 487 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 VARSP26640 1264 aaKnown RBP15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 PSME3P61289 254 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 NFKB2Q00653 900 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 HMGCS1Q01581 520 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 LIX1Q8N485 282 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 SCRN2Q96FV2 425 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 HERPUD2Q9BSE4 406 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 TMEM150CB9EJG8 249 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 HNRNPRO43390 633 aaKnown RBP15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 PAPSS2O95340 614 aaPredicted RBP15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 SYPP08247 313 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 HNRNPA2B1P22626 353 aaKnown RBP15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 ASMTP46597 345 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 DUSP3P51452 185 aaPredicted RBP15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 GSCP56915 257 aaPredicted RBP15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 CSTF3Q12996 717 aaKnown RBP15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 SIM2Q14190 667 aaPredicted RBP15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 PPM1MQ96MI6 270 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 FCRL3Q96P31 734 aaPredicted RBP15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 SLC40A1Q9NP59 571 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 EXOSC4Q9NPD3 245 aaKnown RBP15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 ATP6V1HQ9UI12 483 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 ACSL5Q9ULC5 683 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 MAP4K5Q9Y4K4 846 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 DGKBQ9Y6T7 804 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 EVPLQ92817 2033 aa15.39■□□□□ 0.05
PPFIA1-222ENST00000532504 KLK3P07288 261 aaPredicted RBP15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 ARSDP51689 593 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 HNRNPKP61978 463 aaKnown RBP eCLIP15.38■□□□□ 0.054e-8■■■■■ 29
PPFIA1-222ENST00000532504 SEMA3AQ14563 771 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 MLF2Q15773 248 aaPredicted RBP15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 CCDC81Q6ZN84 652 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 SCML4Q8N228 414 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 METTL27Q8N6F8 245 aaPredicted RBP15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 CNTD1Q8N815 330 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 ZSWIM3Q96MP5 696 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 TGM7Q96PF1 710 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 PNO1Q9NRX1 252 aaKnown RBP15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 NPIPB15A6NHN6 443 aaPredicted RBP15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 DRGXA6NNA5 263 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 CHURC1-FNTBB4DL54 471 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 CHRNGP07510 517 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 PRSS56P0CW18 603 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 FASP25445 335 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 HNMTP50135 292 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 NEK2P51955 445 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 MEF2AQ02078 507 aaPredicted RBP15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 PUS10Q3MIT2 529 aaKnown RBP15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 ACSBG2Q5FVE4 666 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 TADA1Q96BN2 335 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 NPAS2Q99743 824 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 H3BNH8 94 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 ACRV1P26436 265 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 IL12RB1P42701 662 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 TMEM26Q6ZUK4 368 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 OR9A1PQ8NGU1 263 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 TRIM39Q9HCM9 518 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 SCN3BQ9NY72 215 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 MARCH4Q9P2E8 410 aaPredicted RBP15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 YBX2Q9Y2T7 364 aaKnown RBP15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 PGGT1BP53609 377 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 ZBTB49Q6ZSB9 765 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 PNPLA1Q8N8W4 532 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 UHRF1Q96T88 793 aaPredicted RBP15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 UGT2B28Q9BY64 529 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 SLC32A1Q9H598 525 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 POLR1BQ9H9Y6 1135 aa15.38■□□□□ 0.05
PPFIA1-222ENST00000532504 OR6C74A6NCV1 312 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 B4GALT3O60512 393 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 AP2A2O94973 939 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 BTN3A2P78410 334 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 LYSMD4Q5XG99 296 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 DHDDSQ86SQ9 333 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 STK32CQ86UX6 486 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 TMEM126BQ8IUX1 230 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 DCAKDQ8WVC6 231 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 EXD2Q9NVH0 621 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 CDH22Q9UJ99 828 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 ERVK-11Q9UQG0 969 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 KERAO60938 352 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 HMGCLP35914 325 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 SGSHP51688 502 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 SLC9A5Q14940 896 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 HEPACAMQ14CZ8 416 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 ARHGAP40Q5TG30 622 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 TRNP1Q6NT89 227 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 TDRPQ86YL5 185 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 IL17FQ96PD4 163 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 EFCAB11Q9BUY7 163 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 FTSJ1Q9UET6 329 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 SCML1Q9UN30 329 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 CBSLP0DN79 551 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 HMGA1P17096 107 aaKnown RBP15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 SLC6A2P23975 617 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 CBSP35520 551 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 SLC36A4Q6YBV0 504 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 BANPQ8N9N5 519 aa15.37■□□□□ 0.05
PPFIA1-222ENST00000532504 ZNF563Q8TA94 476 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms