RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 BTN3A1O00481 513 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 PRAMEF10O60809 474 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 C1orf105O95561 183 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 JMJD7P0C870 316 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 POLR2CP19387 275 aaPredicted RBP13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 CD9P21926 228 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 SSTR1P30872 391 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 CSTF2P33240 577 aaKnown RBP eCLIP13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 ABCG1P45844 678 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 GPX6P59796 221 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 CAV1Q03135 178 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 KRT33BQ14525 404 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 CCSMST1Q4G0I0 132 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 RBM20Q5T481 1227 aaKnown RBP13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 CACHD1Q5VU97 1274 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 IRGCQ6NXR0 463 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 C8orf74Q6P047 294 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 KLHL35Q6PF15 583 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 FBXO38Q6PIJ6 1188 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 CYS1Q717R9 158 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 AMIGO1Q86WK6 493 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 OOSP2Q86WS3 158 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 LMNTD1Q8N9Z9 388 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 SIDT2Q8NBJ9 832 aaKnown RBP13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 GSDMBQ8TAX9 411 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 CD200R1Q8TD46 325 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 TAAR9Q96RI9 348 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 GPR21Q99679 349 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 SRMSQ9H3Y6 488 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 APMAPQ9HDC9 416 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 SAYSD1Q9NPB0 183 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 FBXO8Q9NRD0 319 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 THSD1Q9NS62 852 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 POLG2Q9UHN1 485 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 POMT2Q9UKY4 750 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 PLAGL1Q9UM63 463 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 RUVBL2Q9Y230 463 aaKnown RBP13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 PSAT1Q9Y617 370 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 COMMD10Q9Y6G5 202 aa13.52□□□□□ -0.25
TSPAN4-220ENST00000532375 PTPRQQ9UMZ3 2332 aa13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 ANKRD12Q6UB98 2062 aa13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 CTAGE15A4D2H0 777 aa13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 PRICKLE3O43900 615 aaPredicted RBP13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 CTAGE8P0CG41 777 aa13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 NELFEP18615 380 aaKnown RBP13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 PRDX3P30048 256 aaKnown RBP13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 ECHS1P30084 290 aa13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 PEBP1P30086 187 aaKnown RBP13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 SEPHS1P49903 392 aa13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 MAPK10P53779 464 aa13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 CDKN2DP55273 166 aa13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 SH3BP2P78314 561 aa13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 MGAT5Q09328 741 aa13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 TMED2Q15363 201 aa13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 KLHL38Q2WGJ6 581 aa13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 CTAGE6Q86UF2 777 aa13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 DTX1Q86Y01 620 aa13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 CTAGE4Q8IX94 777 aa13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 LINC01555Q8NAE3 123 aa13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 MNS1Q8NEH6 495 aa13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 CFAP61Q8NHU2 1237 aa13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 PYROXD1Q8WU10 500 aa13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 UBXN4Q92575 508 aa13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 INPP5DQ92835 1189 aa13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 CD180Q99467 661 aa13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 NDNQ99608 321 aa13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 PITPNM3Q9BZ71 974 aa13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 SPHK1Q9NYA1 384 aa13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 B3GALT1Q9Y5Z6 326 aa13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 DSPP15924 2871 aaKnown RBP13.51□□□□□ -0.25
TSPAN4-220ENST00000532375 CFAP47Q6ZTR5 3102 aa13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 SEC16AO15027 2179 aa13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 KRT87PA6NCN2 255 aa13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 TLCD2A6NGC4 264 aa13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 CXorf49A8MYA2 514 aaPredicted RBP13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 GFYI3L273 518 aa13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 PSIP1O75475 530 aaKnown RBP13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 PIAS1O75925 651 aa13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 ITPKBP27987 946 aa13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 PKLRP30613 574 aa13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 MAGEA4P43358 317 aa13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 PPM1FP49593 454 aaPredicted RBP13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 PGGT1BP53609 377 aa13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 DNTTIP2Q5QJE6 756 aaKnown RBP13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 ANKS6Q68DC2 871 aa13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 NEK10Q6ZWH5 1172 aa13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 DCUN1D3Q8IWE4 304 aa13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 CARFQ8N187 725 aa13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 D2HGDHQ8N465 521 aa13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 DENND1AQ8TEH3 1009 aa13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 IL17FQ96PD4 163 aa13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 OR2A14Q96R47 310 aa13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 DDA1Q9BW61 102 aa13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 LRRC4CQ9HCJ2 640 aa13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 SLC39A1Q9NY26 324 aa13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 OR6C2Q9NZP2 312 aa13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 AKAP7Q9P0M2 348 aaPredicted RBP13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 CIDEBQ9UHD4 219 aa13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 BTRCQ9Y297 605 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms