RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 TTC1Q99614 292 aa16.27■□□□□ 0.2
CPSF1-207ENST00000531727 CHRNA10Q9GZZ6 450 aa16.27■□□□□ 0.2
CPSF1-207ENST00000531727 ETNK1Q9HBU6 452 aa16.27■□□□□ 0.2
CPSF1-207ENST00000531727 FAM60AQ9NP50 221 aa16.27■□□□□ 0.2
CPSF1-207ENST00000531727 IMPACTQ9P2X3 320 aa16.27■□□□□ 0.2
CPSF1-207ENST00000531727 RIMKLBQ9ULI2 386 aa16.27■□□□□ 0.2
CPSF1-207ENST00000531727 HECTD1Q9ULT8 2610 aa16.26■□□□□ 0.19
CPSF1-207ENST00000531727 BHMG1C9JSJ3 638 aaPredicted RBP16.26■□□□□ 0.19
CPSF1-207ENST00000531727 F8W8V4 182 aa16.26■□□□□ 0.19
CPSF1-207ENST00000531727 OR1I1O60431 355 aa16.26■□□□□ 0.19
CPSF1-207ENST00000531727 TMEM63AO94886 807 aa16.26■□□□□ 0.19
CPSF1-207ENST00000531727 GOT2P00505 430 aaKnown RBP16.26■□□□□ 0.19
CPSF1-207ENST00000531727 CHRM5P08912 532 aaPredicted RBP16.26■□□□□ 0.19
CPSF1-207ENST00000531727 TPBGLP0DKB5 382 aa16.26■□□□□ 0.19
CPSF1-207ENST00000531727 SRSF1Q07955 248 aaKnown RBP eCLIP16.26■□□□□ 0.19
CPSF1-207ENST00000531727 NCF4Q15080 339 aa16.26■□□□□ 0.19
CPSF1-207ENST00000531727 FAM69BQ5VUD6 431 aa16.26■□□□□ 0.19
CPSF1-207ENST00000531727 PAPD7Q5XG87 772 aaKnown RBP16.26■□□□□ 0.19
CPSF1-207ENST00000531727 ZNF385CQ66K41 422 aaPredicted RBP16.26■□□□□ 0.19
CPSF1-207ENST00000531727 PPP1R21Q6ZMI0 780 aa16.26■□□□□ 0.19
CPSF1-207ENST00000531727 TRIM73Q86UV7 250 aa16.26■□□□□ 0.19
CPSF1-207ENST00000531727 ATCAYQ86WG3 371 aa16.26■□□□□ 0.19
CPSF1-207ENST00000531727 GAS2L3Q86XJ1 694 aa16.26■□□□□ 0.19
CPSF1-207ENST00000531727 GPR135Q8IZ08 494 aa16.26■□□□□ 0.19
CPSF1-207ENST00000531727 FLVCR1-AS1Q8TAF5 88 aa16.26■□□□□ 0.19
CPSF1-207ENST00000531727 N4BP2L2Q92802 583 aaPredicted RBP16.26■□□□□ 0.19
CPSF1-207ENST00000531727 SPHK1Q9NYA1 384 aa16.26■□□□□ 0.19
CPSF1-207ENST00000531727 OR6C2Q9NZP2 312 aa16.26■□□□□ 0.19
CPSF1-207ENST00000531727 ANKMY1Q9P2S6 941 aa16.26■□□□□ 0.19
CPSF1-207ENST00000531727 SLC2A6Q9UGQ3 507 aa16.26■□□□□ 0.19
CPSF1-207ENST00000531727 TDRKHQ9Y2W6 561 aaKnown RBP16.26■□□□□ 0.19
CPSF1-207ENST00000531727 C9J4A7 227 aa16.25■□□□□ 0.19
CPSF1-207ENST00000531727 E7EVH7 732 aa16.25■□□□□ 0.19
CPSF1-207ENST00000531727 H3BMH7 237 aa16.25■□□□□ 0.19
CPSF1-207ENST00000531727 KDM1AO60341 852 aa16.25■□□□□ 0.19
CPSF1-207ENST00000531727 CEACAM4O75871 244 aa16.25■□□□□ 0.19
CPSF1-207ENST00000531727 IFNB1P01574 187 aa16.25■□□□□ 0.19
CPSF1-207ENST00000531727 AGXTP21549 392 aa16.25■□□□□ 0.19
CPSF1-207ENST00000531727 ADRA1DP25100 572 aa16.25■□□□□ 0.19
CPSF1-207ENST00000531727 CDC25BP30305 580 aa16.25■□□□□ 0.19
CPSF1-207ENST00000531727 GRIA1P42261 906 aa16.25■□□□□ 0.19
CPSF1-207ENST00000531727 ACVR1Q04771 509 aa16.25■□□□□ 0.19
CPSF1-207ENST00000531727 ZIC1Q15915 447 aa16.25■□□□□ 0.19
CPSF1-207ENST00000531727 SLC13A5Q86YT5 568 aaPredicted RBP16.25■□□□□ 0.19
CPSF1-207ENST00000531727 ZBTB2Q8N680 514 aa16.25■□□□□ 0.19
CPSF1-207ENST00000531727 OR4L1Q8NH43 312 aa16.25■□□□□ 0.19
CPSF1-207ENST00000531727 ZNF778Q96MU6 729 aa16.25■□□□□ 0.19
CPSF1-207ENST00000531727 DHRS4Q9BTZ2 278 aa16.25■□□□□ 0.19
CPSF1-207ENST00000531727 ZNF148Q9UQR1 794 aa16.25■□□□□ 0.19
CPSF1-207ENST00000531727 ZNF451Q9Y4E5 1061 aa16.25■□□□□ 0.19
CPSF1-207ENST00000531727 PCDHGB7Q9Y5F8 929 aa16.25■□□□□ 0.19
CPSF1-207ENST00000531727 AP1M2Q9Y6Q5 423 aa16.25■□□□□ 0.19
CPSF1-207ENST00000531727 FLNCQ14315 2725 aa16.25■□□□□ 0.19
CPSF1-207ENST00000531727 A0A0J9YY10 115 aa16.24■□□□□ 0.19
CPSF1-207ENST00000531727 HCRTR1O43613 425 aa16.24■□□□□ 0.19
CPSF1-207ENST00000531727 OR2B3O76000 313 aa16.24■□□□□ 0.19
CPSF1-207ENST00000531727 GABRA4P48169 554 aa16.24■□□□□ 0.19
CPSF1-207ENST00000531727 KIR2DS3Q14952 304 aa16.24■□□□□ 0.19
CPSF1-207ENST00000531727 SLC5A12Q1EHB4 618 aa16.24■□□□□ 0.19
CPSF1-207ENST00000531727 DEFB110Q30KQ9 67 aa16.24■□□□□ 0.19
CPSF1-207ENST00000531727 NADK2Q4G0N4 442 aa16.24■□□□□ 0.19
CPSF1-207ENST00000531727 MED25Q71SY5 747 aa16.24■□□□□ 0.19
CPSF1-207ENST00000531727 ZNF534Q76KX8 674 aa16.24■□□□□ 0.19
CPSF1-207ENST00000531727 NLRP9Q7RTR0 991 aa16.24■□□□□ 0.19
CPSF1-207ENST00000531727 SLC22A15Q8IZD6 547 aa16.24■□□□□ 0.19
CPSF1-207ENST00000531727 TMEM102Q8N9M5 508 aaPredicted RBP16.24■□□□□ 0.19
CPSF1-207ENST00000531727 SPC24Q8NBT2 197 aa16.24■□□□□ 0.19
CPSF1-207ENST00000531727 OR6P1Q8NGX9 317 aa16.24■□□□□ 0.19
CPSF1-207ENST00000531727 UBE2Q2Q8WVN8 375 aa16.24■□□□□ 0.19
CPSF1-207ENST00000531727 C1orf54Q8WWF1 131 aa16.24■□□□□ 0.19
CPSF1-207ENST00000531727 SGSM3Q96HU1 749 aa16.24■□□□□ 0.19
CPSF1-207ENST00000531727 C17orf62Q9BQA9 187 aa16.24■□□□□ 0.19
CPSF1-207ENST00000531727 CASS4Q9NQ75 786 aa16.24■□□□□ 0.19
CPSF1-207ENST00000531727 RAB6BQ9NRW1 208 aa16.24■□□□□ 0.19
CPSF1-207ENST00000531727 PLAGL1Q9UM63 463 aa16.24■□□□□ 0.19
CPSF1-207ENST00000531727 PADI2Q9Y2J8 665 aa16.24■□□□□ 0.19
CPSF1-207ENST00000531727 TCAF1Q9Y4C2 921 aa16.24■□□□□ 0.19
CPSF1-207ENST00000531727 PCSK5Q92824 1860 aa16.24■□□□□ 0.19
CPSF1-207ENST00000531727 SPTBP11277 2137 aa16.24■□□□□ 0.19
CPSF1-207ENST00000531727 TTLL8A6PVC2 850 aa16.23■□□□□ 0.19
CPSF1-207ENST00000531727 ISM1B1AKI9 464 aa16.23■□□□□ 0.19
CPSF1-207ENST00000531727 CBSLP0DN79 551 aa16.23■□□□□ 0.19
CPSF1-207ENST00000531727 ETS1P14921 441 aa16.23■□□□□ 0.19
CPSF1-207ENST00000531727 PEBP1P30086 187 aaKnown RBP16.23■□□□□ 0.19
CPSF1-207ENST00000531727 CCR7P32248 378 aa16.23■□□□□ 0.19
CPSF1-207ENST00000531727 CBSP35520 551 aa16.23■□□□□ 0.19
CPSF1-207ENST00000531727 PPARGP37231 505 aaPredicted RBP16.23■□□□□ 0.19
CPSF1-207ENST00000531727 CSE1LP55060 971 aaKnown RBP16.23■□□□□ 0.19
CPSF1-207ENST00000531727 PRAMEP78395 509 aa16.23■□□□□ 0.19
CPSF1-207ENST00000531727 ATP1A4Q13733 1029 aa16.23■□□□□ 0.19
CPSF1-207ENST00000531727 SEMA3AQ14563 771 aa16.23■□□□□ 0.19
CPSF1-207ENST00000531727 FASTKD1Q53R41 847 aaKnown RBP16.23■□□□□ 0.19
CPSF1-207ENST00000531727 DNAJC21Q5F1R6 531 aaKnown RBP16.23■□□□□ 0.19
CPSF1-207ENST00000531727 RHBDD2Q6NTF9 364 aa16.23■□□□□ 0.19
CPSF1-207ENST00000531727 PRUNE1Q86TP1 453 aa16.23■□□□□ 0.19
CPSF1-207ENST00000531727 RAB43Q86YS6 212 aa16.23■□□□□ 0.19
CPSF1-207ENST00000531727 FAM26EQ8N5C1 309 aa16.23■□□□□ 0.19
CPSF1-207ENST00000531727 GLIS1Q8NBF1 620 aa16.23■□□□□ 0.19
CPSF1-207ENST00000531727 FDCSPQ8NFU4 85 aa16.23■□□□□ 0.19
CPSF1-207ENST00000531727 PEX13Q92968 403 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms