RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 BTN3A1O00481 513 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 ZSCAN9O15535 394 aaPredicted RBP7.91□□□□□ -1.14
CD44-232ENST00000531118 KCNJ13O60928 360 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 OR2B3O76000 313 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 SLCO2B1O94956 709 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 RASAL1O95294 804 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 HSP90AA1P07900 732 aaKnown RBP7.91□□□□□ -1.14
CD44-232ENST00000531118 ARAFP10398 606 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 PSMA2P25787 234 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 PBLDP30039 288 aaPredicted RBP7.91□□□□□ -1.14
CD44-232ENST00000531118 SERPINB6P35237 376 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 ZNF135P52742 658 aaPredicted RBP7.91□□□□□ -1.14
CD44-232ENST00000531118 CTSCP53634 463 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 CACNG1Q06432 222 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 CAMK4Q16566 473 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 RBBP7Q16576 425 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 ERMARDQ5T6L9 678 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 TMEM198Q66K66 360 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 DCUN1D2Q6PH85 259 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 KIRREL2Q6UWL6 708 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 Q6ZPB1 254 aaPredicted RBP7.91□□□□□ -1.14
CD44-232ENST00000531118 AMZ2Q86W34 360 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 FAM20CQ8IXL6 584 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 C19orf47Q8N9M1 422 aaKnown RBP7.91□□□□□ -1.14
CD44-232ENST00000531118 OR11G2Q8NGC1 345 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 DNAJB8Q8NHS0 232 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 PHF10Q8WUB8 498 aaKnown RBP7.91□□□□□ -1.14
CD44-232ENST00000531118 ZNF653Q96CK0 615 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 RMDN2Q96LZ7 410 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 VPS35Q96QK1 796 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 LMF1Q96S06 567 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 SMR3AQ99954 134 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 ZNF559Q9BR84 538 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 WWP1Q9H0M0 922 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 ZWILCHQ9H900 591 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 MRM3Q9HC36 420 aaKnown RBP7.91□□□□□ -1.14
CD44-232ENST00000531118 SLC22A11Q9NSA0 550 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 TXLNGQ9NUQ3 528 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 PLA2G3Q9NZ20 509 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 GDF2Q9UK05 429 aaPredicted RBP7.91□□□□□ -1.14
CD44-232ENST00000531118 TMPRSS11EQ9UL52 423 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 ZNF835Q9Y2P0 537 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 ZDHHC9Q9Y397 364 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 ZNF711Q9Y462 761 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 DNMT3AQ9Y6K1 912 aaPredicted RBP7.91□□□□□ -1.14
CD44-232ENST00000531118 AP1M2Q9Y6Q5 423 aa7.91□□□□□ -1.14
CD44-232ENST00000531118 HRNRQ86YZ3 2850 aaPredicted RBP7.9□□□□□ -1.14
CD44-232ENST00000531118 HIVEP2P31629 2446 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 DNAJC13O75165 2243 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 FOXO6A8MYZ6 492 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 H3BRJ5 948 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 HCRTR1O43613 425 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 PRPSAP2O60256 369 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 PRAMEF2O60811 474 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 WISP2O76076 250 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 USP1O94782 785 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 F10P00742 488 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 HLA-DQB2P05538 268 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 CTSBP07858 339 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 ITGAXP20702 1163 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 UGT1A4P22310 534 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 AMPD1P23109 780 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 NDUFS1P28331 727 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 PRDX3P30048 256 aaKnown RBP7.9□□□□□ -1.14
CD44-232ENST00000531118 GABRA4P48169 554 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 HCAR3P49019 387 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 TMPRSS15P98073 1019 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 NIPAL4Q0D2K0 466 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 PCOLCEQ15113 449 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 VWA3BQ502W6 1294 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 COX15Q7KZN9 410 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 OR4E2Q8NGC2 313 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 GDAP1Q8TB36 358 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 ARRDC2Q8TBH0 407 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 CA5BP1Q8WTZ4 195 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 N4BP2L2Q92802 583 aaPredicted RBP7.9□□□□□ -1.14
CD44-232ENST00000531118 SDCCAG3Q96C92 435 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 ARSGQ96EG1 525 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 TIGD1Q96MW7 591 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 ALPK1Q96QP1 1244 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 MESP1Q9BRJ9 268 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 STK33Q9BYT3 514 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 GANQ9H2C0 597 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 NDST4Q9H3R1 872 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 WDR54Q9H977 334 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 ZFYVE1Q9HBF4 777 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 RAD18Q9NS91 495 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 SAMSN1Q9NSI8 373 aaKnown RBP7.9□□□□□ -1.14
CD44-232ENST00000531118 RWDD2AQ9UIY3 292 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 ST6GALNAC2Q9UJ37 374 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 SHOC2Q9UQ13 582 aa7.9□□□□□ -1.14
CD44-232ENST00000531118 OR2AG2A6NM03 316 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 ANKRD66B4E2M5 251 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 BTN3A3O00478 584 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 GPR39O43194 453 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 MFSD11O43934 449 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 POP7O75817 140 aaKnown RBP7.89□□□□□ -1.15
CD44-232ENST00000531118 MT-CYBP00156 380 aaPredicted RBP7.89□□□□□ -1.15
CD44-232ENST00000531118 HPP00738 406 aa7.89□□□□□ -1.15
CD44-232ENST00000531118 HEXAP06865 529 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms