RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 CACHD1Q5VU97 1274 aa11.53□□□□□ -0.56
LTBP3-219ENST00000530990 AMIGO1Q86WK6 493 aa11.53□□□□□ -0.56
LTBP3-219ENST00000530990 DCUN1D3Q8IWE4 304 aa11.53□□□□□ -0.56
LTBP3-219ENST00000530990 PALM2Q8IXS6 379 aa11.53□□□□□ -0.56
LTBP3-219ENST00000530990 LSMEM2Q8N112 164 aa11.53□□□□□ -0.56
LTBP3-219ENST00000530990 PMEPA1Q969W9 287 aa11.53□□□□□ -0.56
LTBP3-219ENST00000530990 ZDHHC12Q96GR4 267 aa11.53□□□□□ -0.56
LTBP3-219ENST00000530990 MAP3K3Q99759 626 aa11.53□□□□□ -0.56
LTBP3-219ENST00000530990 SMYD2Q9NRG4 433 aa11.53□□□□□ -0.56
LTBP3-219ENST00000530990 FAM114A2Q9NRY5 505 aa11.53□□□□□ -0.56
LTBP3-219ENST00000530990 THSD1Q9NS62 852 aa11.53□□□□□ -0.56
LTBP3-219ENST00000530990 POLG2Q9UHN1 485 aa11.53□□□□□ -0.56
LTBP3-219ENST00000530990 APC2O95996 2303 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 IGHV5-51A0A0C4DH38 117 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 TCRBV9S1A1TA0A576 114 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 TLCD2A6NGC4 264 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 TOX3O15405 576 aaPredicted RBP11.52□□□□□ -0.57
LTBP3-219ENST00000530990 PRAMEF10O60809 474 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 RPN2P04844 631 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 ECHS1P30084 290 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 PKLRP30613 574 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 SHMT2P34897 504 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 MLLT3P42568 568 aaPredicted RBP11.52□□□□□ -0.57
LTBP3-219ENST00000530990 MAGEA4P43358 317 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 CDKN2DP55273 166 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 PRKAA1Q13131 559 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 GRB7Q14451 532 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 KLHL38Q2WGJ6 581 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 TTLL9Q3SXZ7 439 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 CCSMST1Q4G0I0 132 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 DNTTIP2Q5QJE6 756 aaKnown RBP11.52□□□□□ -0.57
LTBP3-219ENST00000530990 ARMC6Q6NXE6 501 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 CLEC14AQ86T13 490 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 CPNE9Q8IYJ1 553 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 ADGRF3Q8IZF5 1079 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 BMPERQ8N8U9 685 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 GPATCH11Q8N954 259 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 SNIP1Q8TAD8 396 aaKnown RBP11.52□□□□□ -0.57
LTBP3-219ENST00000530990 PPM1MQ96MI6 270 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 ZNF578Q96N58 590 aaPredicted RBP11.52□□□□□ -0.57
LTBP3-219ENST00000530990 IL17FQ96PD4 163 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 MENTQ9BUN1 341 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 SIDT1Q9NXL6 827 aaKnown RBP11.52□□□□□ -0.57
LTBP3-219ENST00000530990 FOXJ2Q9P0K8 574 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 POMT2Q9UKY4 750 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 RAXQ9Y2V3 346 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 DHRS7Q9Y394 339 aa11.52□□□□□ -0.57
LTBP3-219ENST00000530990 ANKRD12Q6UB98 2062 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 CFAP47Q6ZTR5 3102 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 ARHGEF33A8MVX0 844 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 CXorf49A8MYA2 514 aaPredicted RBP11.51□□□□□ -0.57
LTBP3-219ENST00000530990 C9orf172C9J069 976 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 MATN4O95460 622 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 C1orf105O95561 183 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 C1QAP02745 245 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 CHRM5P08912 532 aaPredicted RBP11.51□□□□□ -0.57
LTBP3-219ENST00000530990 MCM3P25205 808 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 SLC5A2P31639 672 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 PGGT1BP53609 377 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 PCBP4P57723 403 aaKnown RBP11.51□□□□□ -0.57
LTBP3-219ENST00000530990 ERVPABLB-1P60509 514 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 SH3BP2P78314 561 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 KYNUQ16719 465 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.51□□□□□ -0.57
LTBP3-219ENST00000530990 UBAP2Q5T6F2 1119 aaKnown RBP11.51□□□□□ -0.57
LTBP3-219ENST00000530990 HECTD2Q5U5R9 776 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 FAM45BPQ6NSW5 357 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 FBXO38Q6PIJ6 1188 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 PIWIL4Q7Z3Z4 852 aaKnown RBP11.51□□□□□ -0.57
LTBP3-219ENST00000530990 STRA8Q7Z7C7 330 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 SLC26A11Q86WA9 606 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 ZC3HC1Q86WB0 502 aaKnown RBP11.51□□□□□ -0.57
LTBP3-219ENST00000530990 LMNTD1Q8N9Z9 388 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 FAM45AQ8TCE6 357 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 IFT81Q8WYA0 676 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 INPP5DQ92835 1189 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 USP7Q93009 1102 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 FOPNLQ96NB1 174 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 CD180Q99467 661 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 OLFM1Q99784 485 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 MCMBPQ9BTE3 642 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 FAM129AQ9BZQ8 928 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 L2HGDHQ9H9P8 463 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 LRRC4CQ9HCJ2 640 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 SLC39A1Q9NY26 324 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 SPHK1Q9NYA1 384 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 TAS2R13Q9NYV9 303 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 ACTR10Q9NZ32 417 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 SEMA5BQ9P283 1151 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 KLHL42Q9P2K6 505 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 MTRF1LQ9UGC7 380 aaKnown RBP11.51□□□□□ -0.57
LTBP3-219ENST00000530990 TRMT6Q9UJA5 497 aaKnown RBP11.51□□□□□ -0.57
LTBP3-219ENST00000530990 CORO1CQ9ULV4 474 aaPredicted RBP11.51□□□□□ -0.57
LTBP3-219ENST00000530990 PCDHGA7Q9Y5G6 932 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 ACACAQ13085 2346 aa11.51□□□□□ -0.57
LTBP3-219ENST00000530990 PIPSLA2A3N6 862 aa11.5□□□□□ -0.57
LTBP3-219ENST00000530990 FAM159BA6NKW6 160 aa11.5□□□□□ -0.57
LTBP3-219ENST00000530990 C2orf74A8MZ97 194 aa11.5□□□□□ -0.57
LTBP3-219ENST00000530990 B4E171 279 aa11.5□□□□□ -0.57
LTBP3-219ENST00000530990 MATN2O00339 956 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms