RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 OR2A14Q96R47 310 aa18.26■□□□□ 0.51
SSRP1-204ENST00000529002 CCM2Q9BSQ5 444 aa18.26■□□□□ 0.51
SSRP1-204ENST00000529002 LHPPQ9H008 270 aa18.26■□□□□ 0.51
SSRP1-204ENST00000529002 FAM96AQ9H5X1 160 aa18.26■□□□□ 0.51
SSRP1-204ENST00000529002 SOX17Q9H6I2 414 aaPredicted RBP18.26■□□□□ 0.51
SSRP1-204ENST00000529002 ASB8Q9H765 288 aa18.26■□□□□ 0.51
SSRP1-204ENST00000529002 COG4Q9H9E3 785 aa18.26■□□□□ 0.51
SSRP1-204ENST00000529002 CHST11Q9NPF2 352 aa18.26■□□□□ 0.51
SSRP1-204ENST00000529002 FAM153AQ9UHL3 310 aa18.26■□□□□ 0.51
SSRP1-204ENST00000529002 FKBPLQ9UIM3 349 aa18.26■□□□□ 0.51
SSRP1-204ENST00000529002 PKP3Q9Y446 797 aa18.26■□□□□ 0.51
SSRP1-204ENST00000529002 F10P00742 488 aa18.25■□□□□ 0.51
SSRP1-204ENST00000529002 DYNLT1P63172 113 aa18.25■□□□□ 0.51
SSRP1-204ENST00000529002 PDK1Q15118 436 aa18.25■□□□□ 0.51
SSRP1-204ENST00000529002 IRAK1BP1Q5VVH5 260 aa18.25■□□□□ 0.51
SSRP1-204ENST00000529002 SLC9A4Q6AI14 798 aa18.25■□□□□ 0.51
SSRP1-204ENST00000529002 ISLR2Q6UXK2 745 aa18.25■□□□□ 0.51
SSRP1-204ENST00000529002 HOOK3Q86VS8 718 aa18.25■□□□□ 0.51
SSRP1-204ENST00000529002 DTWD1Q8N5C7 304 aa18.25■□□□□ 0.51
SSRP1-204ENST00000529002 IPMKQ8NFU5 416 aa18.25■□□□□ 0.51
SSRP1-204ENST00000529002 FLVCR1-AS1Q8TAF5 88 aa18.25■□□□□ 0.51
SSRP1-204ENST00000529002 HM13Q8TCT9 377 aa18.25■□□□□ 0.51
SSRP1-204ENST00000529002 COG1Q8WTW3 980 aa18.25■□□□□ 0.51
SSRP1-204ENST00000529002 NR4A3Q92570 626 aa18.25■□□□□ 0.51
SSRP1-204ENST00000529002 OXNAD1Q96HP4 312 aaPredicted RBP18.25■□□□□ 0.51
SSRP1-204ENST00000529002 SPSB2Q99619 263 aa18.25■□□□□ 0.51
SSRP1-204ENST00000529002 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.25■□□□□ 0.511e-11■■□□□ 11.5
SSRP1-204ENST00000529002 SAE1Q9UBE0 346 aaPredicted RBP18.25■□□□□ 0.51
SSRP1-204ENST00000529002 SUCOQ9UBS9 1254 aaKnown RBP18.25■□□□□ 0.51
SSRP1-204ENST00000529002 KLHL20Q9Y2M5 609 aa18.25■□□□□ 0.51
SSRP1-204ENST00000529002 GTF3C1Q12789 2109 aa18.25■□□□□ 0.51
SSRP1-204ENST00000529002 CPAMD8Q8IZJ3 1885 aa18.24■□□□□ 0.51
SSRP1-204ENST00000529002 C3orf70A6NLC5 250 aaPredicted RBP18.24■□□□□ 0.51
SSRP1-204ENST00000529002 STX7O15400 261 aaKnown RBP18.24■□□□□ 0.51
SSRP1-204ENST00000529002 UNC5CO95185 931 aa18.24■□□□□ 0.51
SSRP1-204ENST00000529002 CD63P08962 238 aa18.24■□□□□ 0.51
SSRP1-204ENST00000529002 MST1P26927 711 aa18.24■□□□□ 0.51
SSRP1-204ENST00000529002 PRLHRP49683 370 aa18.24■□□□□ 0.51
SSRP1-204ENST00000529002 SLC1A5Q15758 541 aa18.24■□□□□ 0.51
SSRP1-204ENST00000529002 NKG7Q16617 165 aa18.24■□□□□ 0.51
SSRP1-204ENST00000529002 FCRL6Q6DN72 434 aa18.24■□□□□ 0.51
SSRP1-204ENST00000529002 RPUSD3Q6P087 351 aaKnown RBP18.24■□□□□ 0.51
SSRP1-204ENST00000529002 SARM1Q6SZW1 724 aa18.24■□□□□ 0.51
SSRP1-204ENST00000529002 UNC5AQ6ZN44 842 aa18.24■□□□□ 0.51
SSRP1-204ENST00000529002 TTLL10Q6ZVT0 673 aa18.24■□□□□ 0.51
SSRP1-204ENST00000529002 COX15Q7KZN9 410 aa18.24■□□□□ 0.51
SSRP1-204ENST00000529002 AMER2Q8N7J2 671 aa18.24■□□□□ 0.51
SSRP1-204ENST00000529002 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.24■□□□□ 0.51
SSRP1-204ENST00000529002 CPLX3Q8WVH0 158 aa18.24■□□□□ 0.51
SSRP1-204ENST00000529002 TRIM56Q9BRZ2 755 aaKnown RBP18.24■□□□□ 0.51
SSRP1-204ENST00000529002 APOL1O14791 398 aa18.23■□□□□ 0.51
SSRP1-204ENST00000529002 SRP72O76094 671 aaKnown RBP18.23■□□□□ 0.51
SSRP1-204ENST00000529002 TPBGLP0DKB5 382 aa18.23■□□□□ 0.51
SSRP1-204ENST00000529002 ADORA2A-AS1P86434 159 aa18.23■□□□□ 0.51
SSRP1-204ENST00000529002 WASHC5Q12768 1159 aa18.23■□□□□ 0.51
SSRP1-204ENST00000529002 MFAP5Q13361 173 aa18.23■□□□□ 0.51
SSRP1-204ENST00000529002 BOP1Q14137 746 aaKnown RBP18.23■□□□□ 0.51
SSRP1-204ENST00000529002 NFKBIBQ15653 356 aa18.23■□□□□ 0.51
SSRP1-204ENST00000529002 TUBB8Q3ZCM7 444 aa18.23■□□□□ 0.51
SSRP1-204ENST00000529002 ZNF658BQ4V348 819 aaPredicted RBP18.23■□□□□ 0.51
SSRP1-204ENST00000529002 TLDC1Q6P9B6 456 aa18.23■□□□□ 0.51
SSRP1-204ENST00000529002 SPNS3Q6ZMD2 512 aa18.23■□□□□ 0.51
SSRP1-204ENST00000529002 RBM43Q6ZSC3 357 aaKnown RBP18.23■□□□□ 0.51
SSRP1-204ENST00000529002 DNAJC22Q8N4W6 341 aa18.23■□□□□ 0.51
SSRP1-204ENST00000529002 METTL27Q8N6F8 245 aaPredicted RBP18.23■□□□□ 0.51
SSRP1-204ENST00000529002 OR11G2Q8NGC1 345 aa18.23■□□□□ 0.51
SSRP1-204ENST00000529002 OR4K2Q8NGD2 314 aa18.23■□□□□ 0.51
SSRP1-204ENST00000529002 NDC1Q9BTX1 674 aa18.23■□□□□ 0.51
SSRP1-204ENST00000529002 HACD3Q9P035 362 aa18.23■□□□□ 0.51
SSRP1-204ENST00000529002 CTTNBP2NLQ9P2B4 639 aa18.23■□□□□ 0.51
SSRP1-204ENST00000529002 CTSFQ9UBX1 484 aa18.23■□□□□ 0.51
SSRP1-204ENST00000529002 PLAGL1Q9UM63 463 aa18.23■□□□□ 0.51
SSRP1-204ENST00000529002 SPG11Q96JI7 2443 aa18.22■□□□□ 0.51
SSRP1-204ENST00000529002 IFRD1O00458 451 aaPredicted RBP18.22■□□□□ 0.51
SSRP1-204ENST00000529002 CCL22O00626 93 aa18.22■□□□□ 0.51
SSRP1-204ENST00000529002 PPP1R12AO14974 1030 aaPredicted RBP18.22■□□□□ 0.51
SSRP1-204ENST00000529002 MCM3P25205 808 aa18.22■□□□□ 0.51
SSRP1-204ENST00000529002 CA7P43166 264 aa18.22■□□□□ 0.51
SSRP1-204ENST00000529002 KIR3DL1P43629 444 aa18.22■□□□□ 0.51
SSRP1-204ENST00000529002 GCGRP47871 477 aa18.22■□□□□ 0.51
SSRP1-204ENST00000529002 ARG2P78540 354 aa18.22■□□□□ 0.51
SSRP1-204ENST00000529002 OLIG2Q13516 323 aa18.22■□□□□ 0.51
SSRP1-204ENST00000529002 TMEM207Q6UWW9 146 aa18.22■□□□□ 0.51
SSRP1-204ENST00000529002 OVCH1Q7RTY7 1134 aa18.22■□□□□ 0.51
SSRP1-204ENST00000529002 CDH24Q86UP0 819 aa18.22■□□□□ 0.51
SSRP1-204ENST00000529002 RFX6Q8HWS3 928 aa18.22■□□□□ 0.51
SSRP1-204ENST00000529002 LMNTD1Q8N9Z9 388 aa18.22■□□□□ 0.51
SSRP1-204ENST00000529002 OR5AR1Q8NGP9 310 aa18.22■□□□□ 0.51
SSRP1-204ENST00000529002 TFGQ92734 400 aaPredicted RBP18.22■□□□□ 0.51
SSRP1-204ENST00000529002 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.22■□□□□ 0.51
SSRP1-204ENST00000529002 DCUN1D1Q96GG9 259 aa18.22■□□□□ 0.51
SSRP1-204ENST00000529002 NAP1L5Q96NT1 182 aaPredicted RBP18.22■□□□□ 0.51
SSRP1-204ENST00000529002 MVB12BQ9H7P6 319 aa18.22■□□□□ 0.51
SSRP1-204ENST00000529002 ANO10Q9NW15 660 aa18.22■□□□□ 0.51
SSRP1-204ENST00000529002 CRLS1Q9UJA2 301 aa18.22■□□□□ 0.51
SSRP1-204ENST00000529002 A0A0J9YY10 115 aa18.21■□□□□ 0.51
SSRP1-204ENST00000529002 AGTP01019 485 aa18.21■□□□□ 0.51
SSRP1-204ENST00000529002 CHRM5P08912 532 aaPredicted RBP18.21■□□□□ 0.51
SSRP1-204ENST00000529002 PEBP1P30086 187 aaKnown RBP18.21■□□□□ 0.51
SSRP1-204ENST00000529002 PBX1P40424 430 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms