RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 IGHV5-10-1A0A0J9YXX1 117 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 MROH6A6NGR9 719 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 OR2AG2A6NM03 316 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 ERI2A8K979 691 aaKnown RBP8.26□□□□□ -1.09
SSBP3-212ENST00000528930 KIR2DS3K7RE56 304 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 ZW10O43264 779 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 RAD1O60671 282 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 KCNJ13O60928 360 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 POP7O75817 140 aaKnown RBP8.26□□□□□ -1.09
SSBP3-212ENST00000528930 ZSCAN5DPP0CG00 497 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 PRSS56P0CW18 603 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 SLC2A4P14672 509 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 IDSP22304 550 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 RPL10P27635 214 aaKnown RBP8.26□□□□□ -1.09
SSBP3-212ENST00000528930 SSTR2P30874 369 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 MC4RP32245 332 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 CXCR5P32302 372 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 CSF2RBP32927 897 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 RPL22P35268 128 aaKnown RBP8.26□□□□□ -1.09
SSBP3-212ENST00000528930 FDFT1P37268 417 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 HADHAP40939 763 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 KCNJ1P48048 391 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 CDKN1CP49918 316 aaPredicted RBP8.26□□□□□ -1.09
SSBP3-212ENST00000528930 LIMK2P53671 638 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 GPLD1P80108 840 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 MC1RQ01726 317 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 DMPKQ09013 629 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 NFATC2Q13469 925 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 BIRC2Q13490 618 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 SEMA5AQ13591 1074 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 GTF2H3Q13889 308 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 POU6F1Q14863 301 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 KIR2DS5Q14953 304 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 C16orf72Q14CZ0 275 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 ATP1A1-AS1Q5TC04 95 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 AGAP9Q5VTM2 703 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 WASH2PQ6VEQ5 465 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 FAM83HQ6ZRV2 1179 aaPredicted RBP8.26□□□□□ -1.09
SSBP3-212ENST00000528930 SNX20Q7Z614 316 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 SLC9B2Q86UD5 537 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 TGIF2LYQ8IUE0 185 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 TRAPPC5Q8IUR0 188 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 RASGEF1CQ8N431 466 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 OR4D9Q8NGE8 314 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 OR52K1Q8NGK4 314 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 NAT14Q8WUY8 206 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 PMEPA1Q969W9 287 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 LRRC45Q96CN5 670 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 CDKN2AIPNLQ96HQ2 116 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 TTC25Q96NG3 672 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 SLC38A3Q99624 504 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 OSGEPL1Q9H4B0 414 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 FAM96AQ9H5X1 160 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 GPN2Q9H9Y4 310 aaPredicted RBP8.26□□□□□ -1.09
SSBP3-212ENST00000528930 WASH6PQ9NQA3 447 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 NLE1Q9NVX2 485 aaPredicted RBP8.26□□□□□ -1.09
SSBP3-212ENST00000528930 TMEM9Q9P0T7 183 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 PDP2Q9P2J9 529 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 CPNE7Q9UBL6 633 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 WDR37Q9Y2I8 494 aa8.26□□□□□ -1.09
SSBP3-212ENST00000528930 RPH3AQ9Y2J0 694 aaPredicted RBP8.26□□□□□ -1.09
SSBP3-212ENST00000528930 IGLV3-16A0A075B6K0 115 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 ANKUB1A6NFN9 424 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 CEP104O60308 925 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 ZG16O60844 167 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 THRAP10827 490 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 MSH3P20585 1137 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 MPSTP25325 297 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 ART1P52961 327 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 PMS2P54278 862 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 EPHA4P54764 986 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 DRG2P55039 364 aaKnown RBP8.25□□□□□ -1.09
SSBP3-212ENST00000528930 CDH17Q12864 832 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 ART3Q13508 389 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 NFE2L1Q14494 772 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 SEPT7Q16181 437 aaKnown RBP8.25□□□□□ -1.09
SSBP3-212ENST00000528930 KCTD19Q17RG1 926 aaPredicted RBP8.25□□□□□ -1.09
SSBP3-212ENST00000528930 LONRF2Q1L5Z9 754 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 MAP9Q49MG5 647 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 GPR33Q49SQ1 333 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 BCL7AQ4VC05 210 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 FNBP1LQ5T0N5 605 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 ZNF468Q5VIY5 522 aaPredicted RBP8.25□□□□□ -1.09
SSBP3-212ENST00000528930 TMEM71Q6P5X7 295 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 LINC00523Q86TU6 105 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 AMZ2Q86W34 360 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 NXPE1Q8N323 547 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 PRELID2Q8N945 189 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 CCDC89Q8N998 374 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 RCBTB1Q8NDN9 531 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 STYXQ8WUJ0 223 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 MAIP1Q8WWC4 291 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 STARD8Q92502 1023 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 SH3KBP1Q96B97 665 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 ULK4Q96C45 1275 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 MS4A14Q96JA4 679 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 ZNF514Q96K75 400 aaPredicted RBP8.25□□□□□ -1.09
SSBP3-212ENST00000528930 LINC00615Q96LM1 132 aaPredicted RBP8.25□□□□□ -1.09
SSBP3-212ENST00000528930 CCDC74BQ96LY2 380 aa8.25□□□□□ -1.09
SSBP3-212ENST00000528930 RANBP9Q96S59 729 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms