RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 ERVK-10P10266 1014 aa12.99□□□□□ -0.33
CAPN1-215ENST00000528396 NELFEP18615 380 aaKnown RBP12.99□□□□□ -0.33
CAPN1-215ENST00000528396 RPL21P46778 160 aaKnown RBP12.99□□□□□ -0.33
CAPN1-215ENST00000528396 HSD11B2P80365 405 aa12.99□□□□□ -0.33
CAPN1-215ENST00000528396 PDIA2Q13087 525 aaKnown RBP12.99□□□□□ -0.33
CAPN1-215ENST00000528396 CLN3Q13286 438 aa12.99□□□□□ -0.33
CAPN1-215ENST00000528396 IL11RAQ14626 422 aa12.99□□□□□ -0.33
CAPN1-215ENST00000528396 WHAMMP3Q1A5X7 153 aa12.99□□□□□ -0.33
CAPN1-215ENST00000528396 MANEAQ5SRI9 462 aa12.99□□□□□ -0.33
CAPN1-215ENST00000528396 CNSTQ6PJW8 725 aa12.99□□□□□ -0.33
CAPN1-215ENST00000528396 KMT5CQ86Y97 462 aa12.99□□□□□ -0.33
CAPN1-215ENST00000528396 ANKMY2Q8IV38 441 aa12.99□□□□□ -0.33
CAPN1-215ENST00000528396 VRK3Q8IV63 474 aa12.99□□□□□ -0.33
CAPN1-215ENST00000528396 CARFQ8N187 725 aa12.99□□□□□ -0.33
CAPN1-215ENST00000528396 AGGF1Q8N302 714 aaeCLIP12.99□□□□□ -0.33
CAPN1-215ENST00000528396 BMPERQ8N8U9 685 aa12.99□□□□□ -0.33
CAPN1-215ENST00000528396 KLHL6Q8WZ60 621 aa12.99□□□□□ -0.33
CAPN1-215ENST00000528396 ELMO2Q96JJ3 720 aa12.99□□□□□ -0.33
CAPN1-215ENST00000528396 FANCEQ9HB96 536 aa12.99□□□□□ -0.33
CAPN1-215ENST00000528396 WHRNQ9P202 907 aa12.99□□□□□ -0.33
CAPN1-215ENST00000528396 CDC23Q9UJX2 597 aa12.99□□□□□ -0.33
CAPN1-215ENST00000528396 POMT2Q9UKY4 750 aa12.99□□□□□ -0.33
CAPN1-215ENST00000528396 PLAGL1Q9UM63 463 aa12.99□□□□□ -0.33
CAPN1-215ENST00000528396 COMMD10Q9Y6G5 202 aa12.99□□□□□ -0.33
CAPN1-215ENST00000528396 PTPRQQ9UMZ3 2332 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 BTN3A3O00478 584 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 BTN3A1O00481 513 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 VPS26AO75436 327 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 ATP5DP30049 168 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 CCNFP41002 786 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 CARSP49589 748 aaKnown RBP12.98□□□□□ -0.33
CAPN1-215ENST00000528396 RAB28P51157 221 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 KPNA2P52292 529 aaKnown RBP12.98□□□□□ -0.33
CAPN1-215ENST00000528396 CXADRP78310 365 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 SH3BP2P78314 561 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 MPP1Q00013 466 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 ACY1Q03154 408 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 TUBB3Q13509 450 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 ZNF789Q5FWF6 425 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 C8orf74Q6P047 294 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 UNC5AQ6ZN44 842 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 CCDC81Q6ZN84 652 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 PPP1R3BQ86XI6 285 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 ZBED8Q8IZ13 594 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 UNC5BQ8IZJ1 945 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 IL22RA1Q8N6P7 574 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 ZSCAN1Q8NBB4 408 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 MNS1Q8NEH6 495 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 MAGEC3Q8TD91 643 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 N4BP2L2Q92802 583 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-215ENST00000528396 PMEPA1Q969W9 287 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 CERS2Q96G23 380 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 PWWP2AQ96N64 755 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 CCNL2Q96S94 520 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-215ENST00000528396 ULBP3Q9BZM4 244 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 LATS2Q9NRM7 1088 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 ACTR10Q9NZ32 417 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 OR6C2Q9NZP2 312 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 ZFATQ9P243 1243 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 RARRES3Q9UL19 164 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 ICKQ9UPZ9 632 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 CDYLQ9Y232 598 aa12.98□□□□□ -0.33
CAPN1-215ENST00000528396 SLC9B1P1A6NJY1 282 aa12.97□□□□□ -0.33
CAPN1-215ENST00000528396 ISM1B1AKI9 464 aa12.97□□□□□ -0.33
CAPN1-215ENST00000528396 F7P08709 466 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-215ENST00000528396 EBLN1P0CF75 366 aa12.97□□□□□ -0.33
CAPN1-215ENST00000528396 PRDX3P30048 256 aaKnown RBP12.97□□□□□ -0.33
CAPN1-215ENST00000528396 CAV1Q03135 178 aa12.97□□□□□ -0.33
CAPN1-215ENST00000528396 KCNAB1Q14722 419 aa12.97□□□□□ -0.33
CAPN1-215ENST00000528396 TGIF1Q15583 401 aa12.97□□□□□ -0.33
CAPN1-215ENST00000528396 UGT3A1Q6NUS8 523 aa12.97□□□□□ -0.33
CAPN1-215ENST00000528396 KIAA0408Q6ZU52 694 aa12.97□□□□□ -0.33
CAPN1-215ENST00000528396 IGDCC3Q8IVU1 814 aa12.97□□□□□ -0.33
CAPN1-215ENST00000528396 PALM2Q8IXS6 379 aa12.97□□□□□ -0.33
CAPN1-215ENST00000528396 ADGRF3Q8IZF5 1079 aa12.97□□□□□ -0.33
CAPN1-215ENST00000528396 CACNA2D3Q8IZS8 1091 aa12.97□□□□□ -0.33
CAPN1-215ENST00000528396 C2CD4AQ8NCU7 369 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-215ENST00000528396 FBXO36Q8NEA4 188 aa12.97□□□□□ -0.33
CAPN1-215ENST00000528396 PYROXD1Q8WU10 500 aa12.97□□□□□ -0.33
CAPN1-215ENST00000528396 KCNJ9Q92806 393 aa12.97□□□□□ -0.33
CAPN1-215ENST00000528396 INPP5DQ92835 1189 aa12.97□□□□□ -0.33
CAPN1-215ENST00000528396 KIAA1143Q96AT1 154 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-215ENST00000528396 RAD51AP1Q96B01 352 aa12.97□□□□□ -0.33
CAPN1-215ENST00000528396 SLC41A2Q96JW4 573 aa12.97□□□□□ -0.33
CAPN1-215ENST00000528396 RAB11FIP5Q9BXF6 653 aa12.97□□□□□ -0.33
CAPN1-215ENST00000528396 APMAPQ9HDC9 416 aa12.97□□□□□ -0.33
CAPN1-215ENST00000528396 FAM114A2Q9NRY5 505 aa12.97□□□□□ -0.33
CAPN1-215ENST00000528396 C1GALT1Q9NS00 363 aa12.97□□□□□ -0.33
CAPN1-215ENST00000528396 SIDT1Q9NXL6 827 aaKnown RBP12.97□□□□□ -0.33
CAPN1-215ENST00000528396 CIDEBQ9UHD4 219 aa12.97□□□□□ -0.33
CAPN1-215ENST00000528396 LNPEPQ9UIQ6 1025 aa12.97□□□□□ -0.33
CAPN1-215ENST00000528396 TRMT6Q9UJA5 497 aaKnown RBP12.97□□□□□ -0.33
CAPN1-215ENST00000528396 TEX264Q9Y6I9 313 aa12.97□□□□□ -0.33
CAPN1-215ENST00000528396 CELSR3Q9NYQ7 3312 aa12.97□□□□□ -0.33
CAPN1-215ENST00000528396 LAMA5O15230 3695 aa12.96□□□□□ -0.33
CAPN1-215ENST00000528396 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.96□□□□□ -0.33
CAPN1-215ENST00000528396 RAD1O60671 282 aa12.96□□□□□ -0.33
CAPN1-215ENST00000528396 STK17BO94768 372 aa12.96□□□□□ -0.33
CAPN1-215ENST00000528396 HAUS5O94927 633 aa12.96□□□□□ -0.33
CAPN1-215ENST00000528396 CATP04040 527 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms