RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 SMAD6O43541 496 aaKnown RBP4.14□□□□□ -1.75
CD44-226ENST00000527889 CACNG3O60359 315 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 UGT1A9O60656 530 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 PRAMEF4O60810 478 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 ZMPSTE24O75844 475 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 FAM155BO75949 473 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 ANXA9O76027 345 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 CD160O95971 181 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 PRKCGP05129 697 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 IVLP07476 585 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 RNASE1P07998 156 aaKnown RBP4.14□□□□□ -1.75
CD44-226ENST00000527889 GAAP10253 952 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 MLNP12872 115 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 ARSAP15289 507 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 ATP6V1B1P15313 513 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 CREB1P16220 341 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 STMN1P16949 149 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 PFKLP17858 780 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 PGAM1P18669 254 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 NR1D1P20393 614 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 SDHBP21912 280 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 SP100P23497 879 aaPredicted RBP4.14□□□□□ -1.75
CD44-226ENST00000527889 NMBRP28336 390 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 PHBP35232 272 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 ADRA1AP35348 466 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 SERPINF1P36955 418 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 VIPR2P41587 438 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 IFNAR2P48551 515 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 STK19P49842 368 aaPredicted RBP4.14□□□□□ -1.75
CD44-226ENST00000527889 GTF2A1P52655 376 aaPredicted RBP4.14□□□□□ -1.75
CD44-226ENST00000527889 MAGOHP61326 146 aaKnown RBP4.14□□□□□ -1.75
CD44-226ENST00000527889 RPS16P62249 146 aaKnown RBP4.14□□□□□ -1.75
CD44-226ENST00000527889 MPP1Q00013 466 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 MPP3Q13368 585 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 GALNT3Q14435 633 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 POU6F1Q14863 301 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 CRYMQ14894 314 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 CYTH1Q15438 398 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 ZSCAN26Q16670 478 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 KBTBD12Q3ZCT8 623 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 MPPE1Q53F39 396 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 LY6G5CQ5SRR4 150 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 ATXN7L2Q5T6C5 722 aaPredicted RBP4.14□□□□□ -1.75
CD44-226ENST00000527889 FYB2Q5VWT5 728 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 STEAP4Q687X5 459 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 TTC19Q6DKK2 380 aaPredicted RBP4.14□□□□□ -1.75
CD44-226ENST00000527889 NAPEPLDQ6IQ20 393 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 RETSATQ6NUM9 610 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 JMJD6Q6NYC1 403 aaPredicted RBP4.14□□□□□ -1.75
CD44-226ENST00000527889 FAM180BQ6P0A1 224 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 SYCE2Q6PIF2 218 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 ETV3LQ6ZN32 361 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 CXXC5Q7LFL8 322 aaKnown RBP4.14□□□□□ -1.75
CD44-226ENST00000527889 ASCL5Q7RTU5 278 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 SETD3Q86TU7 594 aaPredicted RBP4.14□□□□□ -1.75
CD44-226ENST00000527889 SLC44A2Q8IWA5 706 aaPredicted RBP4.14□□□□□ -1.75
CD44-226ENST00000527889 CCDC117Q8IWD4 279 aaPredicted RBP4.14□□□□□ -1.75
CD44-226ENST00000527889 CTAGE3PQ8IX95 158 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 KLHDC8BQ8IXV7 354 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 FAM26EQ8N5C1 309 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 TEX26Q8N6G2 289 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 AGBL5Q8NDL9 886 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 PIK3C3Q8NEB9 887 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 WDR48Q8TAF3 677 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 ARRDC2Q8TBH0 407 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 DCAKDQ8WVC6 231 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 ZNF75CPQ92670 426 aaPredicted RBP4.14□□□□□ -1.75
CD44-226ENST00000527889 ATP2A3Q93084 1043 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 MUL1Q969V5 352 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 TLCD1Q96CP7 247 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 RMDN1Q96DB5 314 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 LRRC39Q96DD0 335 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 ALG14Q96F25 216 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 ZFYVE19Q96K21 471 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 CNDP2Q96KP4 475 aaKnown RBP4.14□□□□□ -1.75
CD44-226ENST00000527889 RPL10LQ96L21 214 aaKnown RBP4.14□□□□□ -1.75
CD44-226ENST00000527889 SMIM14Q96QK8 99 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 PAFAH2Q99487 392 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 SELENOSQ9BQE4 189 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 HEPHQ9BQS7 1158 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 CCDC77Q9BR77 488 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 FEM1AQ9BSK4 669 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 TMEM109Q9BVC6 243 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 BBS2Q9BXC9 721 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 FSD1LQ9BXM9 530 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 FRMD8Q9BZ67 464 aaPredicted RBP4.14□□□□□ -1.75
CD44-226ENST00000527889 ROPN1BQ9BZX4 212 aaPredicted RBP4.14□□□□□ -1.75
CD44-226ENST00000527889 POLR1EQ9GZS1 481 aaKnown RBP4.14□□□□□ -1.75
CD44-226ENST00000527889 NSUN3Q9H649 340 aaKnown RBP4.14□□□□□ -1.75
CD44-226ENST00000527889 KIF9Q9HAQ2 790 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 ROPN1Q9HAT0 212 aaPredicted RBP4.14□□□□□ -1.75
CD44-226ENST00000527889 SMURF2Q9HAU4 748 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 UGT1A7Q9HAW7 530 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 UGT1A10Q9HAW8 530 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 UGT1A8Q9HAW9 530 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 BCO1Q9HAY6 547 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 CD320Q9NPF0 282 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 TRPV5Q9NQA5 729 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 TCF7L2Q9NQB0 619 aa4.14□□□□□ -1.75
CD44-226ENST00000527889 DLL4Q9NR61 685 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms