RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 PRPSAP1Q14558 356 aa15.55■□□□□ 0.08
PTPRU-210ENST00000527027 ZIC1Q15915 447 aa15.55■□□□□ 0.08
PTPRU-210ENST00000527027 NKAIN1Q4KMZ8 207 aa15.55■□□□□ 0.08
PTPRU-210ENST00000527027 CUZD1Q86UP6 607 aa15.55■□□□□ 0.08
PTPRU-210ENST00000527027 TRIM73Q86UV7 250 aa15.55■□□□□ 0.08
PTPRU-210ENST00000527027 CCDC50Q8IVM0 306 aa15.55■□□□□ 0.08
PTPRU-210ENST00000527027 KATNAL2Q8IYT4 538 aa15.55■□□□□ 0.08
PTPRU-210ENST00000527027 UBE2Q2Q8WVN8 375 aa15.55■□□□□ 0.08
PTPRU-210ENST00000527027 OR2A14Q96R47 310 aa15.55■□□□□ 0.08
PTPRU-210ENST00000527027 FERMT1Q9BQL6 677 aa15.55■□□□□ 0.08
PTPRU-210ENST00000527027 ZBTB20Q9HC78 741 aaPredicted RBP15.55■□□□□ 0.08
PTPRU-210ENST00000527027 AGPAT4Q9NRZ5 378 aa15.55■□□□□ 0.08
PTPRU-210ENST00000527027 ABHD10Q9NUJ1 306 aa15.55■□□□□ 0.08
PTPRU-210ENST00000527027 ICKQ9UPZ9 632 aa15.55■□□□□ 0.08
PTPRU-210ENST00000527027 CDYLQ9Y232 598 aa15.55■□□□□ 0.08
PTPRU-210ENST00000527027 NTNG1Q9Y2I2 539 aa15.55■□□□□ 0.08
PTPRU-210ENST00000527027 PCDHGA10Q9Y5H3 936 aa15.55■□□□□ 0.08
PTPRU-210ENST00000527027 MASP2O00187 686 aa15.54■□□□□ 0.08
PTPRU-210ENST00000527027 ZSCAN9O15535 394 aaPredicted RBP15.54■□□□□ 0.08
PTPRU-210ENST00000527027 CNOT3O75175 753 aaKnown RBP15.54■□□□□ 0.08
PTPRU-210ENST00000527027 GSTM1P09488 218 aa15.54■□□□□ 0.08
PTPRU-210ENST00000527027 ATXN8OSP0DMR3 200 aa15.54■□□□□ 0.08
PTPRU-210ENST00000527027 MC4RP32245 332 aa15.54■□□□□ 0.08
PTPRU-210ENST00000527027 CDKN1CP49918 316 aaPredicted RBP15.54■□□□□ 0.08
PTPRU-210ENST00000527027 GSTM4Q03013 218 aa15.54■□□□□ 0.08
PTPRU-210ENST00000527027 CYP2A13Q16696 494 aa15.54■□□□□ 0.08
PTPRU-210ENST00000527027 DEFB110Q30KQ9 67 aa15.54■□□□□ 0.08
PTPRU-210ENST00000527027 MRPL14Q6P1L8 145 aaKnown RBP15.54■□□□□ 0.08
PTPRU-210ENST00000527027 TLDC1Q6P9B6 456 aa15.54■□□□□ 0.08
PTPRU-210ENST00000527027 UNC5AQ6ZN44 842 aa15.54■□□□□ 0.08
PTPRU-210ENST00000527027 BBS12Q6ZW61 710 aa15.54■□□□□ 0.08
PTPRU-210ENST00000527027 PPP1R32Q7Z5V6 425 aa15.54■□□□□ 0.08
PTPRU-210ENST00000527027 SERPINA9Q86WD7 417 aa15.54■□□□□ 0.08
PTPRU-210ENST00000527027 ST6GALNAC3Q8NDV1 305 aa15.54■□□□□ 0.08
PTPRU-210ENST00000527027 HEMGNQ9BXL5 484 aa15.54■□□□□ 0.08
PTPRU-210ENST00000527027 TXLNGQ9NUQ3 528 aa15.54■□□□□ 0.08
PTPRU-210ENST00000527027 DHCR7Q9UBM7 475 aaKnown RBP15.54■□□□□ 0.08
PTPRU-210ENST00000527027 SRPK3Q9UPE1 567 aa15.54■□□□□ 0.08
PTPRU-210ENST00000527027 TRBV5-4A0A0C4DH59 114 aa15.53■□□□□ 0.08
PTPRU-210ENST00000527027 APOC4-APOC2K7ER74 178 aa15.53■□□□□ 0.08
PTPRU-210ENST00000527027 AGPSO00116 658 aa15.53■□□□□ 0.08
PTPRU-210ENST00000527027 APOC2P02655 101 aa15.53■□□□□ 0.08
PTPRU-210ENST00000527027 CTSBP07858 339 aa15.53■□□□□ 0.08
PTPRU-210ENST00000527027 UMODP07911 640 aa15.53■□□□□ 0.08
PTPRU-210ENST00000527027 ACRV1P26436 265 aa15.53■□□□□ 0.08
PTPRU-210ENST00000527027 PSMB4P28070 264 aa15.53■□□□□ 0.08
PTPRU-210ENST00000527027 SHMT2P34897 504 aa15.53■□□□□ 0.08
PTPRU-210ENST00000527027 HADHBP55084 474 aaKnown RBP15.53■□□□□ 0.08
PTPRU-210ENST00000527027 AIMP2Q13155 320 aaKnown RBP15.53■□□□□ 0.08
PTPRU-210ENST00000527027 SLC9A5Q14940 896 aa15.53■□□□□ 0.08
PTPRU-210ENST00000527027 ANKRD20A2Q5SQ80 823 aa15.53■□□□□ 0.08
PTPRU-210ENST00000527027 ANKRD20A1Q5TYW2 823 aa15.53■□□□□ 0.08
PTPRU-210ENST00000527027 ANKRD20A3Q5VUR7 823 aa15.53■□□□□ 0.08
PTPRU-210ENST00000527027 C1QL3Q5VWW1 255 aa15.53■□□□□ 0.08
PTPRU-210ENST00000527027 DENND5AQ6IQ26 1287 aa15.53■□□□□ 0.08
PTPRU-210ENST00000527027 SLC34A3Q8N130 599 aa15.53■□□□□ 0.08
PTPRU-210ENST00000527027 DNAJC22Q8N4W6 341 aa15.53■□□□□ 0.08
PTPRU-210ENST00000527027 CLDN19Q8N6F1 224 aa15.53■□□□□ 0.08
PTPRU-210ENST00000527027 ZNF655Q8N720 491 aaPredicted RBP15.53■□□□□ 0.08
PTPRU-210ENST00000527027 OR5AR1Q8NGP9 310 aa15.53■□□□□ 0.08
PTPRU-210ENST00000527027 NACC2Q96BF6 587 aa15.53■□□□□ 0.08
PTPRU-210ENST00000527027 WDR77Q9BQA1 342 aaPredicted RBP15.53■□□□□ 0.08
PTPRU-210ENST00000527027 GOLPH3Q9H4A6 298 aa15.53■□□□□ 0.08
PTPRU-210ENST00000527027 ARNT2Q9HBZ2 717 aa15.53■□□□□ 0.08
PTPRU-210ENST00000527027 SPHK1Q9NYA1 384 aa15.53■□□□□ 0.08
PTPRU-210ENST00000527027 POLG2Q9UHN1 485 aa15.53■□□□□ 0.08
PTPRU-210ENST00000527027 FEZ2Q9UHY8 353 aaPredicted RBP15.53■□□□□ 0.08
PTPRU-210ENST00000527027 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.53■□□□□ 0.08
PTPRU-210ENST00000527027 A0A0J9YY10 115 aa15.52■□□□□ 0.08
PTPRU-210ENST00000527027 CCL22O00626 93 aa15.52■□□□□ 0.08
PTPRU-210ENST00000527027 LIN7AO14910 233 aaPredicted RBP15.52■□□□□ 0.08
PTPRU-210ENST00000527027 AP2A2O94973 939 aa15.52■□□□□ 0.08
PTPRU-210ENST00000527027 CHRM5P08912 532 aaPredicted RBP15.52■□□□□ 0.08
PTPRU-210ENST00000527027 TPM1P09493 284 aa15.52■□□□□ 0.08
PTPRU-210ENST00000527027 TNFRSF8P28908 595 aa15.52■□□□□ 0.08
PTPRU-210ENST00000527027 MARCKSL1P49006 195 aa15.52■□□□□ 0.08
PTPRU-210ENST00000527027 FOXL2P58012 376 aa15.52■□□□□ 0.08
PTPRU-210ENST00000527027 CCDC181Q5TID7 509 aa15.52■□□□□ 0.08
PTPRU-210ENST00000527027 TAS2R42Q7RTR8 314 aa15.52■□□□□ 0.08
PTPRU-210ENST00000527027 KCNMB4Q86W47 210 aa15.52■□□□□ 0.08
PTPRU-210ENST00000527027 TBC1D21Q8IYX1 336 aa15.52■□□□□ 0.08
PTPRU-210ENST00000527027 FLVCR1-AS1Q8TAF5 88 aa15.52■□□□□ 0.08
PTPRU-210ENST00000527027 TBL1YQ9BQ87 522 aa15.52■□□□□ 0.08
PTPRU-210ENST00000527027 NDC1Q9BTX1 674 aa15.52■□□□□ 0.08
PTPRU-210ENST00000527027 OR6C2Q9NZP2 312 aa15.52■□□□□ 0.08
PTPRU-210ENST00000527027 PLCL2Q9UPR0 1127 aa15.52■□□□□ 0.08
PTPRU-210ENST00000527027 ASF1AQ9Y294 204 aa15.52■□□□□ 0.08
PTPRU-210ENST00000527027 H7C0S8 307 aa15.51■□□□□ 0.07
PTPRU-210ENST00000527027 CBFA2T2O43439 604 aa15.51■□□□□ 0.07
PTPRU-210ENST00000527027 STK10O94804 968 aaKnown RBP15.51■□□□□ 0.07
PTPRU-210ENST00000527027 TPBGLP0DKB5 382 aa15.51■□□□□ 0.07
PTPRU-210ENST00000527027 ITGA3P26006 1051 aa15.51■□□□□ 0.07
PTPRU-210ENST00000527027 ACADLP28330 430 aa15.51■□□□□ 0.07
PTPRU-210ENST00000527027 CDKL3Q8IVW4 592 aaPredicted RBP15.51■□□□□ 0.07
PTPRU-210ENST00000527027 TMEM151BQ8IW70 566 aa15.51■□□□□ 0.07
PTPRU-210ENST00000527027 SRRM1Q8IYB3 904 aaKnown RBP15.51■□□□□ 0.07
PTPRU-210ENST00000527027 ACTL9Q8TC94 416 aa15.51■□□□□ 0.07
PTPRU-210ENST00000527027 PPP4R1Q8TF05 950 aa15.51■□□□□ 0.07
PTPRU-210ENST00000527027 DNAJC1Q96KC8 554 aaKnown RBP15.51■□□□□ 0.07
PTPRU-210ENST00000527027 PPP1R2P1Q96PQ5 205 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms