RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 HADHBP55084 474 aaKnown RBP13.77□□□□□ -0.21
CPSF1-201ENST00000526271 SOX8P57073 446 aa13.77□□□□□ -0.21
CPSF1-201ENST00000526271 PRKAA1Q13131 559 aa13.77□□□□□ -0.21
CPSF1-201ENST00000526271 TFDP3Q5H9I0 405 aa13.77□□□□□ -0.21
CPSF1-201ENST00000526271 MLIPQ5VWP3 458 aa13.77□□□□□ -0.21
CPSF1-201ENST00000526271 AADACL2Q6P093 401 aa13.77□□□□□ -0.21
CPSF1-201ENST00000526271 COX15Q7KZN9 410 aa13.77□□□□□ -0.21
CPSF1-201ENST00000526271 SNX20Q7Z614 316 aa13.77□□□□□ -0.21
CPSF1-201ENST00000526271 AMIGO1Q86WK6 493 aa13.77□□□□□ -0.21
CPSF1-201ENST00000526271 HPS6Q86YV9 775 aa13.77□□□□□ -0.21
CPSF1-201ENST00000526271 DNAJC22Q8N4W6 341 aa13.77□□□□□ -0.21
CPSF1-201ENST00000526271 C19orf47Q8N9M1 422 aaKnown RBP13.77□□□□□ -0.21
CPSF1-201ENST00000526271 ANP32BQ92688 251 aaKnown RBP13.77□□□□□ -0.21
CPSF1-201ENST00000526271 TFGQ92734 400 aaPredicted RBP13.77□□□□□ -0.21
CPSF1-201ENST00000526271 P3H4Q92791 437 aa13.77□□□□□ -0.21
CPSF1-201ENST00000526271 MAP10Q9P2G4 905 aa13.77□□□□□ -0.21
CPSF1-201ENST00000526271 CRLS1Q9UJA2 301 aa13.77□□□□□ -0.21
CPSF1-201ENST00000526271 PLAGL1Q9UM63 463 aa13.77□□□□□ -0.21
CPSF1-201ENST00000526271 SLC5A6Q9Y289 635 aa13.77□□□□□ -0.21
CPSF1-201ENST00000526271 TACC2O95359 2948 aa13.77□□□□□ -0.21
CPSF1-201ENST00000526271 F8P00451 2351 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 PCNX1Q96RV3 2341 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 C5orf60A6NFR6 353 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 HACD1B0YJ81 288 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 MATN2O00339 956 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 SPOPO43791 374 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 MED26O95402 600 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 ACRV1P26436 265 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 MC4RP32245 332 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 HADHAP40939 763 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 CD151P48509 253 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 GEMP55040 296 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 RRADP55042 308 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 SSPNQ14714 243 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 DBN1Q16643 649 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 HIF1AQ16665 826 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 KYNUQ16719 465 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 ZRANB3Q5FWF4 1079 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 ANKRD20A2Q5SQ80 823 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 ANKRD20A1Q5TYW2 823 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 ANKRD20A3Q5VUR7 823 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 KCTD11Q693B1 232 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 BZW1Q7L1Q6 419 aaKnown RBP13.76□□□□□ -0.21
CPSF1-201ENST00000526271 SERPINA9Q86WD7 417 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 IQCKQ8N0W5 287 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 OR2Y1Q8NGV0 311 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 CCDC110Q8TBZ0 833 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 ACTL9Q8TC94 416 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 SGSM3Q96HU1 749 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 COPS8Q99627 209 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 DPH2Q9BQC3 489 aaPredicted RBP13.76□□□□□ -0.21
CPSF1-201ENST00000526271 DHRS4Q9BTZ2 278 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 FSD1LQ9BXM9 530 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 SLC29A3Q9BZD2 475 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 MVB12BQ9H7P6 319 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 FANCEQ9HB96 536 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 ARNT2Q9HBZ2 717 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 ZNHIT6Q9NWK9 470 aaKnown RBP13.76□□□□□ -0.21
CPSF1-201ENST00000526271 ZDHHC3Q9NYG2 299 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 SERTAD3Q9UJW9 196 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 TRHDEQ9UKU6 1024 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 KLHL20Q9Y2M5 609 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 HEBP2Q9Y5Z4 205 aa13.76□□□□□ -0.21
CPSF1-201ENST00000526271 CCDC78A2IDD5 438 aa13.75□□□□□ -0.21
CPSF1-201ENST00000526271 KLHL33A6NCF5 533 aa13.75□□□□□ -0.21
CPSF1-201ENST00000526271 RCCD1A6NED2 376 aa13.75□□□□□ -0.21
CPSF1-201ENST00000526271 C2orf74A8MZ97 194 aa13.75□□□□□ -0.21
CPSF1-201ENST00000526271 H7C0S8 307 aa13.75□□□□□ -0.21
CPSF1-201ENST00000526271 APOC4-APOC2K7ER74 178 aa13.75□□□□□ -0.21
CPSF1-201ENST00000526271 OR2B3O76000 313 aa13.75□□□□□ -0.21
CPSF1-201ENST00000526271 APOC2P02655 101 aa13.75□□□□□ -0.21
CPSF1-201ENST00000526271 CHRM5P08912 532 aaPredicted RBP13.75□□□□□ -0.21
CPSF1-201ENST00000526271 PSMA3P25788 255 aa13.75□□□□□ -0.21
CPSF1-201ENST00000526271 OTUD4Q01804 1114 aaKnown RBP13.75□□□□□ -0.21
CPSF1-201ENST00000526271 Q0VFX4 171 aa13.75□□□□□ -0.21
CPSF1-201ENST00000526271 GRB7Q14451 532 aa13.75□□□□□ -0.21
CPSF1-201ENST00000526271 IGFL2Q6UWQ7 119 aa13.75□□□□□ -0.21
CPSF1-201ENST00000526271 KCNMB4Q86W47 210 aa13.75□□□□□ -0.21
CPSF1-201ENST00000526271 RAB43Q86YS6 212 aa13.75□□□□□ -0.21
CPSF1-201ENST00000526271 ZNF655Q8N720 491 aaPredicted RBP13.75□□□□□ -0.21
CPSF1-201ENST00000526271 LINC01555Q8NAE3 123 aa13.75□□□□□ -0.21
CPSF1-201ENST00000526271 UBE2Q2Q8WVN8 375 aa13.75□□□□□ -0.21
CPSF1-201ENST00000526271 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.75□□□□□ -0.21
CPSF1-201ENST00000526271 SPSB2Q99619 263 aa13.75□□□□□ -0.21
CPSF1-201ENST00000526271 CHRNA10Q9GZZ6 450 aa13.75□□□□□ -0.21
CPSF1-201ENST00000526271 SLC6A20Q9NP91 592 aa13.75□□□□□ -0.21
CPSF1-201ENST00000526271 INTUQ9ULD6 942 aa13.75□□□□□ -0.21
CPSF1-201ENST00000526271 PKDREJQ9NTG1 2253 aa13.75□□□□□ -0.21
CPSF1-201ENST00000526271 SLC5A10A0PJK1 596 aa13.74□□□□□ -0.21
CPSF1-201ENST00000526271 OR51F1A6NGY5 319 aa13.74□□□□□ -0.21
CPSF1-201ENST00000526271 C2orf81A6NN90 581 aa13.74□□□□□ -0.21
CPSF1-201ENST00000526271 GOLGA6L6A8MZA4 724 aa13.74□□□□□ -0.21
CPSF1-201ENST00000526271 C9J4A7 227 aa13.74□□□□□ -0.21
CPSF1-201ENST00000526271 SOCS6O14544 535 aa13.74□□□□□ -0.21
CPSF1-201ENST00000526271 ZRANB2O95218 330 aaKnown RBP eCLIP13.74□□□□□ -0.21
CPSF1-201ENST00000526271 TPH1P17752 444 aa13.74□□□□□ -0.21
CPSF1-201ENST00000526271 MCM3P25205 808 aa13.74□□□□□ -0.21
CPSF1-201ENST00000526271 CCDC50Q8IVM0 306 aa13.74□□□□□ -0.21
CPSF1-201ENST00000526271 RCOR2Q8IZ40 523 aa13.74□□□□□ -0.21
CPSF1-201ENST00000526271 ULK4Q96C45 1275 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms