RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 MYO9AB2RTY4 2548 aa6.36□□□□□ -1.39
CD44-221ENST00000526000 HIVEP3Q5T1R4 2406 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 MACROD2A1Z1Q3 448 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 C2orf74A8MZ97 194 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 ISM1B1AKI9 464 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 ZG16O60844 167 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 EPOP01588 193 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 UMODP07911 640 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 RALBP11234 206 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 ATP1B2P14415 290 aaPredicted RBP6.35□□□□□ -1.39
CD44-221ENST00000526000 UGT2B7P16662 529 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 MSNP26038 577 aaKnown RBP6.35□□□□□ -1.39
CD44-221ENST00000526000 VARSP26640 1264 aaKnown RBP6.35□□□□□ -1.39
CD44-221ENST00000526000 PSMB4P28070 264 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 MC4RP32245 332 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 CDKN2BP42772 138 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 MARCKSL1P49006 195 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 NR2C2P49116 596 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 GEMP55040 296 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 DCDP81605 110 aaKnown RBP6.35□□□□□ -1.39
CD44-221ENST00000526000 MPP3Q13368 585 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 TFDP2Q14188 446 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 MYBPC3Q14896 1274 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 TAF1AQ15573 450 aaPredicted RBP6.35□□□□□ -1.39
CD44-221ENST00000526000 CYP2A13Q16696 494 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 NKAIN1Q4KMZ8 207 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 BCL7AQ4VC05 210 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 CCDC181Q5TID7 509 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 ZDHHC20Q5W0Z9 365 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 ZNF385CQ66K41 422 aaPredicted RBP6.35□□□□□ -1.39
CD44-221ENST00000526000 LINC00696Q6ZRV3 163 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 BZW1Q7L1Q6 419 aaKnown RBP6.35□□□□□ -1.39
CD44-221ENST00000526000 PPP1R32Q7Z5V6 425 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 TAX1BP1Q86VP1 789 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 FJX1Q86VR8 437 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 KCNMB4Q86W47 210 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 SERPINA9Q86WD7 417 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 SYCE1Q8N0S2 351 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 DTWD1Q8N5C7 304 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 OR5AR1Q8NGP9 310 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 CFAP61Q8NHU2 1237 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 HM13Q8TCT9 377 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 GRHL3Q8TE85 626 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 MARVELD3Q96A59 401 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 PTERQ96BW5 349 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 GBP5Q96PP8 586 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 COPS8Q99627 209 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 GORASP1Q9BQQ3 440 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 MESP1Q9BRJ9 268 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 CCM2Q9BSQ5 444 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 OR52A5Q9H2C5 316 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 SOX17Q9H6I2 414 aaPredicted RBP6.35□□□□□ -1.39
CD44-221ENST00000526000 COG4Q9H9E3 785 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 ATP13A2Q9NQ11 1180 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 TXLNGQ9NUQ3 528 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 DDX56Q9NY93 547 aaKnown RBP6.35□□□□□ -1.39
CD44-221ENST00000526000 SMARCAL1Q9NZC9 954 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.35□□□□□ -1.39
CD44-221ENST00000526000 C5AR2Q9P296 337 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 ICKQ9UPZ9 632 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 PADI2Q9Y2J8 665 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 HEBP2Q9Y5Z4 205 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 ALG6Q9Y672 507 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 PRSS21Q9Y6M0 314 aa6.35□□□□□ -1.39
CD44-221ENST00000526000 CNTRLQ7Z7A1 2325 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 PCSK5Q92824 1860 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 DIDO1Q9BTC0 2240 aaKnown RBP6.34□□□□□ -1.39
CD44-221ENST00000526000 OR51F1A6NGY5 319 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 CFAP99D6REC4 459 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 PRSS44E7EML9 344 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 KLHL18O94889 574 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 ZRANB2O95218 330 aaKnown RBP eCLIP6.34□□□□□ -1.39
CD44-221ENST00000526000 F10P00742 488 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 ALPPP05187 535 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 CHRM5P08912 532 aaPredicted RBP6.34□□□□□ -1.39
CD44-221ENST00000526000 HBQ1P09105 142 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 TPBGLP0DKB5 382 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 ITGALP20701 1170 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 MCM3P25205 808 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 OR1D4P47884 311 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 PRLHRP49683 370 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 ST13P50502 369 aaKnown RBP6.34□□□□□ -1.39
CD44-221ENST00000526000 KCNK10P57789 538 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 CDC16Q13042 620 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 SLC14A2Q15849 920 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 CRB2Q5IJ48 1285 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 LRRC38Q5VT99 294 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 C11orf63Q6NUN7 778 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 AADACL2Q6P093 401 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 ZNF449Q6P9G9 518 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 DARS2Q6PI48 645 aaKnown RBP6.34□□□□□ -1.39
CD44-221ENST00000526000 SPESP1Q6UW49 350 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 RANBP10Q6VN20 620 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 Q6ZS92 163 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 TTLL10Q6ZVT0 673 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 VSIG1Q86XK7 387 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 NXPE1Q8N323 547 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 C19orf47Q8N9M1 422 aaKnown RBP6.34□□□□□ -1.39
CD44-221ENST00000526000 ACRBPQ8NEB7 543 aa6.34□□□□□ -1.39
CD44-221ENST00000526000 OR1N1Q8NGS0 311 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms