RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 TRMOQ9BU70 441 aa4.69□□□□□ -1.66
CD44-220ENST00000525688 NACAP1Q9BZK3 213 aa4.69□□□□□ -1.66
CD44-220ENST00000525688 FAM129AQ9BZQ8 928 aa4.69□□□□□ -1.66
CD44-220ENST00000525688 SLC5A7Q9GZV3 580 aa4.69□□□□□ -1.66
CD44-220ENST00000525688 STMN4Q9H169 189 aaPredicted RBP4.69□□□□□ -1.66
CD44-220ENST00000525688 WNT5BQ9H1J7 359 aa4.69□□□□□ -1.66
CD44-220ENST00000525688 OGFRQ9NZT2 677 aa4.69□□□□□ -1.66
CD44-220ENST00000525688 SEC63Q9UGP8 760 aaKnown RBP4.69□□□□□ -1.66
CD44-220ENST00000525688 ANAPC2Q9UJX6 822 aa4.69□□□□□ -1.66
CD44-220ENST00000525688 CHKBQ9Y259 395 aa4.69□□□□□ -1.66
CD44-220ENST00000525688 MAU2Q9Y6X3 613 aa4.69□□□□□ -1.66
CD44-220ENST00000525688 FAM208AQ9UK61 1670 aaKnown RBP4.69□□□□□ -1.66
CD44-220ENST00000525688 BCL9O00512 1426 aa4.69□□□□□ -1.66
CD44-220ENST00000525688 SMG6Q86US8 1419 aaKnown RBP4.69□□□□□ -1.66
CD44-220ENST00000525688 ARHGEF17Q96PE2 2063 aaPredicted RBP4.69□□□□□ -1.66
CD44-220ENST00000525688 WNK3Q9BYP7 1800 aa4.69□□□□□ -1.66
CD44-220ENST00000525688 LRRC37A3O60309 1634 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 KCNU1A8MYU2 1149 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 KPNA7A9QM74 516 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 FAM86B1E9PN63 330 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 ADAM10O14672 748 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 ANGPT2O15123 496 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 RNF113AO15541 343 aaKnown RBP4.68□□□□□ -1.66
CD44-220ENST00000525688 NMT2O60551 498 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 NDUFB4O95168 129 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 SIX3O95343 332 aaPredicted RBP4.68□□□□□ -1.66
CD44-220ENST00000525688 ABCB1P08183 1280 aaPredicted RBP4.68□□□□□ -1.66
CD44-220ENST00000525688 SRPRAP08240 638 aaKnown RBP4.68□□□□□ -1.66
CD44-220ENST00000525688 ACTN1P12814 892 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 IL7RP16871 459 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 GNLYP22749 145 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 GPTP24298 496 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 SLC15A1P46059 708 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 CCR10P46092 362 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 DHPSP49366 369 aaPredicted RBP4.68□□□□□ -1.66
CD44-220ENST00000525688 CAMPP49913 170 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 MRPL12P52815 198 aaKnown RBP4.68□□□□□ -1.66
CD44-220ENST00000525688 TMPRSS3P57727 454 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 SSBP2P81877 361 aaPredicted RBP4.68□□□□□ -1.66
CD44-220ENST00000525688 ADORA2A-AS1P86434 159 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 ST3GAL1Q11201 340 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 CHIT1Q13231 466 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 SNTB1Q13884 538 aaKnown RBP4.68□□□□□ -1.66
CD44-220ENST00000525688 NAB2Q15742 525 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 STK11Q15831 433 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 HYAL4Q2M3T9 481 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 C2orf68Q2NKX9 166 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 ZSCAN23Q3MJ62 389 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 CDONQ4KMG0 1287 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 KCNT1Q5JUK3 1230 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 DNTTIP2Q5QJE6 756 aaKnown RBP4.68□□□□□ -1.66
CD44-220ENST00000525688 CST9LP1Q5W188 147 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 ETFRF1Q6IPR1 90 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 TMEM270Q6UE05 265 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 PARM1Q6UWI2 310 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 SLC16A12Q6ZSM3 486 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 INTS8Q75QN2 995 aaKnown RBP4.68□□□□□ -1.66
CD44-220ENST00000525688 ERN2Q76MJ5 926 aaKnown RBP4.68□□□□□ -1.66
CD44-220ENST00000525688 MIER3Q7Z3K6 550 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 TSPAN33Q86UF1 283 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 CDH26Q8IXH8 852 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 SFRP1Q8N474 314 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 C16orf52Q8NHV5 167 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 C17orf50Q8WW18 174 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 SPACA9Q96E40 222 aaPredicted RBP4.68□□□□□ -1.66
CD44-220ENST00000525688 DTNBP1Q96EV8 351 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 CFAP57Q96MR6 1250 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 C1QTNF1Q9BXJ1 281 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 MTMR12Q9C0I1 747 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 EHD1Q9H4M9 534 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 FZD3Q9NPG1 666 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 MKKSQ9NPJ1 570 aaPredicted RBP4.68□□□□□ -1.66
CD44-220ENST00000525688 CYSLTR2Q9NS75 346 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 PSD3Q9NYI0 1048 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 LEF1Q9UJU2 399 aaPredicted RBP4.68□□□□□ -1.66
CD44-220ENST00000525688 OSGIN1Q9UJX0 560 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 PRDM4Q9UKN5 801 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 NENFQ9UMX5 172 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 NFS1Q9Y697 457 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 NCAPD2Q15021 1401 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 TNS2Q63HR2 1409 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 RNF123Q5XPI4 1314 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 WDR19Q8NEZ3 1342 aa4.68□□□□□ -1.66
CD44-220ENST00000525688 MAP2P11137 1827 aaKnown RBP4.67□□□□□ -1.66
CD44-220ENST00000525688 OVOS2A0A0G2JMS6 1433 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 TRBC2A0A5B9 178 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 OR2A25A4D2G3 310 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 TMEM202A6NGA9 273 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 SLC9B1P1A6NJY1 282 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 H0YIV9 168 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 CTDSP2O14595 271 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 JRKO75564 520 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 SPAG6O75602 509 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 RGS11O94810 467 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 PLGP00747 810 aaPredicted RBP4.67□□□□□ -1.66
CD44-220ENST00000525688 FYNP06241 537 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 CSF2RAP15509 400 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 CD58P19256 250 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 PON1P27169 355 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 RDXP35241 583 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms