RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 RPA4Q13156 261 aa23.14■■□□□ 1.29
USP47-205ENST00000525257 MYBPC3Q14896 1274 aa23.14■■□□□ 1.29
USP47-205ENST00000525257 ZIC1Q15915 447 aa23.14■■□□□ 1.29
USP47-205ENST00000525257 DENND5AQ6IQ26 1287 aa23.14■■□□□ 1.29
USP47-205ENST00000525257 TAS2R42Q7RTR8 314 aa23.14■■□□□ 1.29
USP47-205ENST00000525257 CDKL3Q8IVW4 592 aaPredicted RBP23.14■■□□□ 1.29
USP47-205ENST00000525257 OR5AR1Q8NGP9 310 aa23.14■■□□□ 1.29
USP47-205ENST00000525257 CCDC110Q8TBZ0 833 aa23.14■■□□□ 1.29
USP47-205ENST00000525257 GBP5Q96PP8 586 aa23.14■■□□□ 1.29
USP47-205ENST00000525257 IFT80Q9P2H3 777 aaPredicted RBP23.14■■□□□ 1.29
USP47-205ENST00000525257 NDOR1Q9UHB4 597 aa23.14■■□□□ 1.29
USP47-205ENST00000525257 TFR2Q9UP52 801 aa23.14■■□□□ 1.29
USP47-205ENST00000525257 CDYLQ9Y232 598 aa23.14■■□□□ 1.29
USP47-205ENST00000525257 AP1M2Q9Y6Q5 423 aa23.14■■□□□ 1.29
USP47-205ENST00000525257 TRBV5-4A0A0C4DH59 114 aa23.13■■□□□ 1.29
USP47-205ENST00000525257 WIPF3A6NGB9 483 aa23.13■■□□□ 1.29
USP47-205ENST00000525257 H3BMH7 237 aa23.13■■□□□ 1.29
USP47-205ENST00000525257 STK10O94804 968 aaKnown RBP23.13■■□□□ 1.29
USP47-205ENST00000525257 CTSBP07858 339 aa23.13■■□□□ 1.29
USP47-205ENST00000525257 MAGEA1P43355 309 aa23.13■■□□□ 1.29
USP47-205ENST00000525257 RHBDD2Q6NTF9 364 aa23.13■■□□□ 1.29
USP47-205ENST00000525257 INPP5DQ92835 1189 aa23.13■■□□□ 1.29
USP47-205ENST00000525257 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.13■■□□□ 1.29
USP47-205ENST00000525257 RANBP9Q96S59 729 aa23.13■■□□□ 1.29
USP47-205ENST00000525257 ZNF552Q9H707 407 aaPredicted RBP23.13■■□□□ 1.29
USP47-205ENST00000525257 P4HTMQ9NXG6 502 aa23.13■■□□□ 1.29
USP47-205ENST00000525257 DHCR7Q9UBM7 475 aaKnown RBP23.13■■□□□ 1.29
USP47-205ENST00000525257 SLC5A6Q9Y289 635 aa23.13■■□□□ 1.29
USP47-205ENST00000525257 ANKUB1A6NFN9 424 aa23.12■■□□□ 1.29
USP47-205ENST00000525257 CNOT3O75175 753 aaKnown RBP23.12■■□□□ 1.29
USP47-205ENST00000525257 CTNNA2P26232 953 aa23.12■■□□□ 1.29
USP47-205ENST00000525257 GABRA4P48169 554 aa23.12■■□□□ 1.29
USP47-205ENST00000525257 EIF3EP60228 445 aaKnown RBP23.12■■□□□ 1.29
USP47-205ENST00000525257 DCDP81605 110 aaKnown RBP23.12■■□□□ 1.29
USP47-205ENST00000525257 C11orf63Q6NUN7 778 aa23.12■■□□□ 1.29
USP47-205ENST00000525257 UNC5AQ6ZN44 842 aa23.12■■□□□ 1.29
USP47-205ENST00000525257 TMEM151BQ8IW70 566 aa23.12■■□□□ 1.29
USP47-205ENST00000525257 ZNF655Q8N720 491 aaPredicted RBP23.12■■□□□ 1.29
USP47-205ENST00000525257 OR2Y1Q8NGV0 311 aa23.12■■□□□ 1.29
USP47-205ENST00000525257 C5orf34Q96MH7 638 aa23.12■■□□□ 1.29
USP47-205ENST00000525257 SPATA13Q96N96 652 aa23.12■■□□□ 1.29
USP47-205ENST00000525257 OR2A14Q96R47 310 aa23.12■■□□□ 1.29
USP47-205ENST00000525257 C19orf43Q9BQ61 176 aa23.12■■□□□ 1.29
USP47-205ENST00000525257 TXLNGQ9NUQ3 528 aa23.12■■□□□ 1.29
USP47-205ENST00000525257 IRAK4Q9NWZ3 460 aa23.12■■□□□ 1.29
USP47-205ENST00000525257 SPHK1Q9NYA1 384 aa23.12■■□□□ 1.29
USP47-205ENST00000525257 ZSCAN9O15535 394 aaPredicted RBP23.11■■□□□ 1.29
USP47-205ENST00000525257 IGHEP01854 428 aa23.11■■□□□ 1.29
USP47-205ENST00000525257 RBP3P10745 1247 aa23.11■■□□□ 1.29
USP47-205ENST00000525257 SHMT2P34897 504 aa23.11■■□□□ 1.29
USP47-205ENST00000525257 ELOAQ14241 798 aaKnown RBP23.11■■□□□ 1.29
USP47-205ENST00000525257 BRD3Q15059 726 aa23.11■■□□□ 1.29
USP47-205ENST00000525257 DARS2Q6PI48 645 aaKnown RBP23.11■■□□□ 1.29
USP47-205ENST00000525257 IGFL3Q6UXB1 125 aa23.11■■□□□ 1.29
USP47-205ENST00000525257 PPP1R32Q7Z5V6 425 aa23.11■■□□□ 1.29
USP47-205ENST00000525257 CNGA4Q8IV77 575 aa23.11■■□□□ 1.29
USP47-205ENST00000525257 PROKR1Q8TCW9 393 aa23.11■■□□□ 1.29
USP47-205ENST00000525257 ZBTB20Q9HC78 741 aaPredicted RBP23.11■■□□□ 1.29
USP47-205ENST00000525257 ASF1AQ9Y294 204 aa23.11■■□□□ 1.29
USP47-205ENST00000525257 TDRKHQ9Y2W6 561 aaKnown RBP23.11■■□□□ 1.29
USP47-205ENST00000525257 COPG1Q9Y678 874 aaKnown RBP23.11■■□□□ 1.29
USP47-205ENST00000525257 A0A0J9YY10 115 aa23.1■■□□□ 1.29
USP47-205ENST00000525257 SNRNP200O75643 2136 aaKnown RBP23.1■■□□□ 1.29
USP47-205ENST00000525257 CHRM5P08912 532 aaPredicted RBP23.1■■□□□ 1.29
USP47-205ENST00000525257 DBN1Q16643 649 aa23.1■■□□□ 1.29
USP47-205ENST00000525257 NKAIN1Q4KMZ8 207 aa23.1■■□□□ 1.29
USP47-205ENST00000525257 PIANPQ8IYJ0 282 aa23.1■■□□□ 1.29
USP47-205ENST00000525257 ZADH2Q8N4Q0 377 aa23.1■■□□□ 1.29
USP47-205ENST00000525257 TM9SF4Q92544 642 aa23.1■■□□□ 1.29
USP47-205ENST00000525257 AP1M1Q9BXS5 423 aa23.1■■□□□ 1.29
USP47-205ENST00000525257 ARNT2Q9HBZ2 717 aa23.1■■□□□ 1.29
USP47-205ENST00000525257 SMARCAL1Q9NZC9 954 aa23.1■■□□□ 1.29
USP47-205ENST00000525257 FEZ2Q9UHY8 353 aaPredicted RBP23.1■■□□□ 1.29
USP47-205ENST00000525257 NTNG1Q9Y2I2 539 aa23.1■■□□□ 1.29
USP47-205ENST00000525257 ENO4A6NNW6 628 aa23.09■■□□□ 1.29
USP47-205ENST00000525257 AKR1B15C9JRZ8 316 aaPredicted RBP23.09■■□□□ 1.29
USP47-205ENST00000525257 PJA2O43164 708 aa23.09■■□□□ 1.29
USP47-205ENST00000525257 KLHL41O60662 606 aa23.09■■□□□ 1.29
USP47-205ENST00000525257 IPO13O94829 963 aaKnown RBP23.09■■□□□ 1.29
USP47-205ENST00000525257 UMODP07911 640 aa23.09■■□□□ 1.29
USP47-205ENST00000525257 CD63P08962 238 aa23.09■■□□□ 1.29
USP47-205ENST00000525257 GSTM1P09488 218 aa23.09■■□□□ 1.29
USP47-205ENST00000525257 GLRBP48167 497 aa23.09■■□□□ 1.29
USP47-205ENST00000525257 COPS2P61201 443 aa23.09■■□□□ 1.29
USP47-205ENST00000525257 GSTM4Q03013 218 aa23.09■■□□□ 1.29
USP47-205ENST00000525257 CYP2A13Q16696 494 aa23.09■■□□□ 1.29
USP47-205ENST00000525257 CUZD1Q86UP6 607 aa23.09■■□□□ 1.29
USP47-205ENST00000525257 FLVCR1-AS1Q8TAF5 88 aa23.09■■□□□ 1.29
USP47-205ENST00000525257 PTERQ96BW5 349 aa23.09■■□□□ 1.29
USP47-205ENST00000525257 LRRC45Q96CN5 670 aa23.09■■□□□ 1.29
USP47-205ENST00000525257 PPP1R2P1Q96PQ5 205 aa23.09■■□□□ 1.29
USP47-205ENST00000525257 OSBPL8Q9BZF1 889 aa23.09■■□□□ 1.29
USP47-205ENST00000525257 NLE1Q9NVX2 485 aaPredicted RBP23.09■■□□□ 1.29
USP47-205ENST00000525257 PLAGL1Q9UM63 463 aa23.09■■□□□ 1.29
USP47-205ENST00000525257 SRPK3Q9UPE1 567 aa23.09■■□□□ 1.29
USP47-205ENST00000525257 PRSS21Q9Y6M0 314 aa23.09■■□□□ 1.29
USP47-205ENST00000525257 PCM1Q15154 2024 aa23.09■■□□□ 1.29
USP47-205ENST00000525257 NUP210LQ5VU65 1888 aa23.09■■□□□ 1.29
USP47-205ENST00000525257 H7C0S8 307 aa23.08■■□□□ 1.29
USP47-205ENST00000525257 LIN7AO14910 233 aaPredicted RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms