RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 EML5Q05BV3 1969 aa3.03□□□□□ -1.92
CSDE1-208ENST00000524652 A0A0U1RQJ8 604 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 SAC3D1A6NKF1 404 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 RASA4BC9J798 803 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 O00370 1275 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 CCL16O15467 120 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 RASA4O43374 803 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 TRAPPC3O43617 180 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 NCK2O43639 380 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 LDB3O75112 727 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 RPP40O75818 363 aaKnown RBP3.02□□□□□ -1.93
CSDE1-208ENST00000524652 GFPT2O94808 682 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 PRSS2P07478 247 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 HAPLN1P10915 354 aaPredicted RBP3.02□□□□□ -1.93
CSDE1-208ENST00000524652 SKILP12757 684 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 UNGP13051 313 aaPredicted RBP3.02□□□□□ -1.93
CSDE1-208ENST00000524652 KLRC2P26717 231 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 ADORA2BP29275 332 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 GNL1P36915 607 aaPredicted RBP3.02□□□□□ -1.93
CSDE1-208ENST00000524652 CCR2P41597 374 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 LHX1P48742 406 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 ALDH18A1P54886 795 aaKnown RBP3.02□□□□□ -1.93
CSDE1-208ENST00000524652 SEC61A1P61619 476 aaKnown RBP3.02□□□□□ -1.93
CSDE1-208ENST00000524652 NTHL1P78549 312 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 RHAGQ02094 409 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 KIF5AQ12840 1032 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 ELAVL2Q12926 359 aaKnown RBP3.02□□□□□ -1.93
CSDE1-208ENST00000524652 PTP4A2Q12974 167 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 CFAP221Q4G0U5 840 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 C2CD6Q53TS8 623 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 FNBP1LQ5T0N5 605 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 STXBP5Q5T5C0 1151 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 PMF1Q6P1K2 205 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 DENND1BQ6P3S1 775 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 AAGABQ6PD74 315 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 TMEM184AQ6ZMB5 413 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 ZNF571Q7Z3V5 609 aaPredicted RBP3.02□□□□□ -1.93
CSDE1-208ENST00000524652 C11orf96Q7Z7L8 435 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 TMEM150AQ86TG1 271 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 UNC93AQ86WB7 457 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 TMC8Q8IU68 726 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 TMEM139Q8IV31 216 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 FAM217AQ8IXS0 508 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 GPR65Q8IYL9 337 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 FAM71AQ8IYT1 594 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 NRSN1Q8IZ57 195 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 TMEM86AQ8N2M4 240 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 DPP10Q8N608 796 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 TC2NQ8N9U0 490 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 NEK11Q8NG66 645 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 ZNF461Q8TAF7 563 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 UBA3Q8TBC4 463 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 SPATA18Q8TC71 538 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 SLC2A14Q8TDB8 520 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 CLEC4CQ8WTT0 213 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 ZNF606Q8WXB4 792 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 PPM1EQ8WY54 764 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 NDRG1Q92597 394 aaKnown RBP3.02□□□□□ -1.93
CSDE1-208ENST00000524652 ZNF707Q96C28 371 aaPredicted RBP3.02□□□□□ -1.93
CSDE1-208ENST00000524652 TCEAL4Q96EI5 215 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 CHP1Q99653 195 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 HNRNPABQ99729 332 aaKnown RBP3.02□□□□□ -1.93
CSDE1-208ENST00000524652 STK33Q9BYT3 514 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 B3GNT4Q9C0J1 378 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 S1PR5Q9H228 398 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 EPS8L2Q9H6S3 715 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 TLE6Q9H808 572 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 CYP3A43Q9HB55 503 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 CSNK1G1Q9HCP0 422 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 ZNF304Q9HCX3 659 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 PLSCR4Q9NRQ2 329 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 MRPL17Q9NRX2 175 aaKnown RBP3.02□□□□□ -1.93
CSDE1-208ENST00000524652 HCFC1R1Q9NWW0 138 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 TAS2R14Q9NYV8 317 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 TSPAN16Q9UKR8 245 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 CDH9Q9ULB4 789 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 NENFQ9UMX5 172 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 SLC12A4Q9UP95 1085 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 FAM50BQ9Y247 325 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 DTX4Q9Y2E6 619 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 YIPF1Q9Y548 306 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 COPG1Q9Y678 874 aaKnown RBP3.02□□□□□ -1.93
CSDE1-208ENST00000524652 DOCK9Q9BZ29 2069 aa3.02□□□□□ -1.93
CSDE1-208ENST00000524652 MUC22E2RYF6 1773 aaPredicted RBP3.02□□□□□ -1.93
CSDE1-208ENST00000524652 MYLKQ15746 1914 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 DMXL1Q9Y485 3027 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 TBC1D3DA0A087WVF3 549 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 TBC1D3IA0A087WXS9 549 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 TBC1D3EA0A087X179 549 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 TBC1D3KA0A087X1G2 549 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 ARHGEF37A1IGU5 675 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 TBC1D3BA6NDS4 549 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 TBC1D3FA6NER0 549 aaPredicted RBP3.01□□□□□ -1.93
CSDE1-208ENST00000524652 GOLGA6L3A6NEY3 463 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 MBD3L5A6NJ08 208 aaPredicted RBP3.01□□□□□ -1.93
CSDE1-208ENST00000524652 TBC1D3LB9A6J9 549 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 F8VP50 259 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 MS4A18H0YCH9 400 aa3.01□□□□□ -1.93
CSDE1-208ENST00000524652 H3BQ06 376 aaPredicted RBP3.01□□□□□ -1.93
CSDE1-208ENST00000524652 M0QYV0 167 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms