RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 IL17CQ9P0M4 197 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 SEC14L3Q9UDX4 400 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 CRLS1Q9UJA2 301 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 HS3ST3B1Q9Y662 390 aa11.2□□□□□ -0.62
SDCBP-211ENST00000523441 CACNA1CQ13936 2221 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 ISM1B1AKI9 464 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 APOL1O14791 398 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 PCDH17O14917 1159 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 KCNN4O15554 427 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 CD63P08962 238 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 MMP11P24347 488 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 KDELR1P24390 212 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 MST1P26927 711 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 SSTR2P30874 369 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 PBX1P40424 430 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 OR1D4P47884 311 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 TLE4Q04727 773 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 MFAP5Q13361 173 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 CDSNQ15517 529 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 TESK1Q15569 626 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 FCRL6Q6DN72 434 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 SARM1Q6SZW1 724 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 IGFL2Q6UWQ7 119 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 RFX6Q8HWS3 928 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 MMP21Q8N119 569 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 C2orf73Q8N5S3 287 aaPredicted RBP11.19□□□□□ -0.62
SDCBP-211ENST00000523441 PLD5Q8N7P1 536 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 CCDC110Q8TBZ0 833 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 CHTF18Q8WVB6 975 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 CCM2Q9BSQ5 444 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 MAK16Q9BXY0 300 aaKnown RBP11.19□□□□□ -0.62
SDCBP-211ENST00000523441 CTTNBP2NLQ9P2B4 639 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 CTSFQ9UBX1 484 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 CIDEBQ9UHD4 219 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 FKBPLQ9UIM3 349 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 TINAGQ9UJW2 476 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 ICKQ9UPZ9 632 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 ARL5AQ9Y689 179 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 MAU2Q9Y6X3 613 aa11.19□□□□□ -0.62
SDCBP-211ENST00000523441 DYTNA2CJ06 578 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 FAM227AF5H4B4 570 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 CCL22O00626 93 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 ZNHIT1O43257 154 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 WISP2O76076 250 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 MSL3P1P0C860 447 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 MCM3P25205 808 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 KIR3DL1P43629 444 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 ST13P50502 369 aaKnown RBP11.18□□□□□ -0.62
SDCBP-211ENST00000523441 ADORA2A-AS1P86434 159 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 PDK1Q15118 436 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 NKG7Q16617 165 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 KRTAP21-3Q3LHN1 58 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 ZDHHC20Q5W0Z9 365 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 UNC5AQ6ZN44 842 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 ARHGEF18Q6ZSZ5 1173 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 APTXQ7Z2E3 356 aaKnown RBP11.18□□□□□ -0.62
SDCBP-211ENST00000523441 TAX1BP1Q86VP1 789 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 AMER2Q8N7J2 671 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 LMNTD1Q8N9Z9 388 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 OR11G2Q8NGC1 345 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 OR4K2Q8NGD2 314 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 OR5AR1Q8NGP9 310 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 HM13Q8TCT9 377 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 COG1Q8WTW3 980 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.18□□□□□ -0.62
SDCBP-211ENST00000523441 MTFMTQ96DP5 389 aaKnown RBP11.18□□□□□ -0.62
SDCBP-211ENST00000523441 OR2A14Q96R47 310 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 SRPK1Q96SB4 655 aaKnown RBP11.18□□□□□ -0.62
SDCBP-211ENST00000523441 XPO4Q9C0E2 1151 aaKnown RBP11.18□□□□□ -0.62
SDCBP-211ENST00000523441 TSPAN10Q9H1Z9 355 aaPredicted RBP11.18□□□□□ -0.62
SDCBP-211ENST00000523441 TRABDQ9H4I3 376 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 COG4Q9H9E3 785 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 RTN4Q9NQC3 1192 aaKnown RBP11.18□□□□□ -0.62
SDCBP-211ENST00000523441 SEMA3GQ9NS98 782 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 AIPL1Q9NZN9 384 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 SAE1Q9UBE0 346 aaPredicted RBP11.18□□□□□ -0.62
SDCBP-211ENST00000523441 FAM153AQ9UHL3 310 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 MYO6Q9UM54 1294 aa11.18□□□□□ -0.62
SDCBP-211ENST00000523441 NIPBLQ6KC79 2804 aaeCLIP11.17□□□□□ -0.62
SDCBP-211ENST00000523441 A0A0J9YY10 115 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 H3BMH7 237 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 PPP1R12AO14974 1030 aaPredicted RBP11.17□□□□□ -0.62
SDCBP-211ENST00000523441 SGTAO43765 313 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 SRP72O76094 671 aaKnown RBP11.17□□□□□ -0.62
SDCBP-211ENST00000523441 CYP1A2P05177 515 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 CELA2AP08217 269 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 RALBP11234 206 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 ITGAXP20702 1163 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 PTPN3P26045 913 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 CD68P34810 354 aaPredicted RBP11.17□□□□□ -0.62
SDCBP-211ENST00000523441 PRKCIP41743 596 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 GRIA3P42263 894 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 CA7P43166 264 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 GABRA4P48169 554 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 ART1P52961 327 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 CASP6P55212 293 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 EEF1A2Q05639 463 aaKnown RBP11.17□□□□□ -0.62
SDCBP-211ENST00000523441 RBPJQ06330 500 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 C3AR1Q16581 482 aa11.17□□□□□ -0.62
SDCBP-211ENST00000523441 BCL7AQ4VC05 210 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms