RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 ZNF441Q8N8Z8 693 aa4.41□□□□□ -1.7
HMGB1P1-201ENST00000522557 TRIML1Q8N9V2 468 aa4.41□□□□□ -1.7
HMGB1P1-201ENST00000522557 OLIG1Q8TAK6 271 aa4.41□□□□□ -1.7
HMGB1P1-201ENST00000522557 GRK7Q8WTQ7 553 aa4.41□□□□□ -1.7
HMGB1P1-201ENST00000522557 RAD54LQ92698 747 aa4.41□□□□□ -1.7
HMGB1P1-201ENST00000522557 DAZLQ92904 295 aaKnown RBP4.41□□□□□ -1.7
HMGB1P1-201ENST00000522557 OR1F2PQ96R84 312 aa4.41□□□□□ -1.7
HMGB1P1-201ENST00000522557 KATNB1Q9BVA0 655 aa4.41□□□□□ -1.7
HMGB1P1-201ENST00000522557 DNAI2Q9GZS0 605 aa4.41□□□□□ -1.7
HMGB1P1-201ENST00000522557 C6orf106Q9H6K1 298 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P1-201ENST00000522557 TCP11L1Q9NUJ3 509 aa4.41□□□□□ -1.7
HMGB1P1-201ENST00000522557 MIOSQ9NXC5 875 aa4.41□□□□□ -1.7
HMGB1P1-201ENST00000522557 DDX43Q9NXZ2 648 aaKnown RBP4.41□□□□□ -1.7
HMGB1P1-201ENST00000522557 LEF1Q9UJU2 399 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P1-201ENST00000522557 MTUS1Q9ULD2 1270 aa4.41□□□□□ -1.7
HMGB1P1-201ENST00000522557 RNF150Q9ULK6 438 aa4.41□□□□□ -1.7
HMGB1P1-201ENST00000522557 PADI2Q9Y2J8 665 aa4.41□□□□□ -1.7
HMGB1P1-201ENST00000522557 KCNK7Q9Y2U2 307 aa4.41□□□□□ -1.7
HMGB1P1-201ENST00000522557 PCDH11YQ9BZA8 1340 aa4.41□□□□□ -1.7
HMGB1P1-201ENST00000522557 IPO8O15397 1037 aaKnown RBP4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 AP5Z1O43299 807 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 RNASEH1O60930 286 aaKnown RBP4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 HSP90AB1P08238 724 aaKnown RBP4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 FCGR1AP12314 374 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 PDGFRAP16234 1089 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 ZNF23P17027 643 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 GNAZP19086 355 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 PRKCIP41743 596 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 MATR3P43243 847 aaKnown RBP eCLIP4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 SLC9A3P48764 834 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 ART1P52961 327 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 ADARP55265 1226 aaKnown RBP4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 RPL24P83731 157 aaKnown RBP4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 GTF2H2Q13888 395 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 RRS1Q15050 365 aaKnown RBP4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 IZUMO4Q1ZYL8 232 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 NHSL2Q5HYW2 709 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 SPDYCQ5MJ68 293 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 SHEQ5VZ18 495 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 KRT39Q6A163 491 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 GTF2H2CQ6P1K8 395 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 MOXD1Q6UVY6 613 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 PLEKHM3Q6ZWE6 761 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 C16orf82Q7Z2V1 217 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 FAM219AQ8IW50 185 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 AMER3Q8N944 861 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 OR5M8Q8NGP6 311 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 FIG4Q92562 907 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 NEURL2Q9BR09 285 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 LRMDAQ9H2I8 198 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 OCIAD1Q9NX40 245 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 POLLQ9UGP5 575 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 PCDHGB1Q9Y5G3 927 aa4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 SPIN1Q9Y657 262 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P1-201ENST00000522557 ACSL3O95573 720 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 HAPLN1P10915 354 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 ACP2P11117 423 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 CBLP22681 906 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 MCCP23508 829 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 EEF1B2P24534 225 aaKnown RBP4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 CRKLP46109 303 aaKnown RBP4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 ALDH3A2P51648 485 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 THOP1P52888 689 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 DLK1P80370 383 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 ZBTB17Q13105 803 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 MFAP5Q13361 173 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 NPTX1Q15818 432 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 CA9Q16790 459 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 ANKRD20A4Q4UJ75 823 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 ANKRD20A8PQ5CZ79 823 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 ANKRD20A2Q5SQ80 823 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 ANKRD20A1Q5TYW2 823 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 ANKRD20A3Q5VUR7 823 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 MFSD12Q6NUT3 480 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 KLC3Q6P597 504 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 IQCA1Q86XH1 822 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 KMT5CQ86Y97 462 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 PTOV1Q86YD1 416 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 NUP93Q8N1F7 819 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 SIX6OS1Q8N1H7 587 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 ANKRD13CQ8N6S4 541 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 GPATCH11Q8N954 259 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 NPEPL1Q8NDH3 523 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 DBF4BQ8NFT6 615 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 AFAP1L1Q8TED9 768 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 PPP4R1Q8TF05 950 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 SSMEM1Q8WWF3 244 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 DNASE1L2Q92874 299 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 ST6GALNAC6Q969X2 333 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 MTERF3Q96E29 417 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 BICD1Q96G01 975 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 CCDC114Q96M63 670 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 C17orf77Q96MU5 243 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 FERMT1Q9BQL6 677 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 FNDC11Q9BVV2 318 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 ZNF350Q9GZX5 532 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 B3GAT1Q9P2W7 334 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 KCNS2Q9ULS6 477 aa4.39□□□□□ -1.71
HMGB1P1-201ENST00000522557 SNX7Q9UNH6 387 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms