RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 FBXL8Q96CD0 374 aa18.03■□□□□ 0.48
TRAPPC9-210ENST00000521667 SLC45A3Q96JT2 553 aa18.03■□□□□ 0.48
TRAPPC9-210ENST00000521667 HOPXQ9BPY8 73 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC9-210ENST00000521667 GPATCH1Q9BRR8 931 aaKnown RBP18.03■□□□□ 0.48
TRAPPC9-210ENST00000521667 TRMT61BQ9BVS5 477 aaKnown RBP18.03■□□□□ 0.48
TRAPPC9-210ENST00000521667 SUCOQ9UBS9 1254 aaKnown RBP18.03■□□□□ 0.48
TRAPPC9-210ENST00000521667 ZNF490Q9ULM2 529 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC9-210ENST00000521667 FADS3Q9Y5Q0 445 aa18.03■□□□□ 0.48
TRAPPC9-210ENST00000521667 STON1Q9Y6Q2 735 aa18.03■□□□□ 0.48
TRAPPC9-210ENST00000521667 ANKRD12Q6UB98 2062 aa18.03■□□□□ 0.48
TRAPPC9-210ENST00000521667 ARHGEF33A8MVX0 844 aa18.03■□□□□ 0.48
TRAPPC9-210ENST00000521667 ACOT8O14734 319 aa18.03■□□□□ 0.48
TRAPPC9-210ENST00000521667 TCN1P20061 433 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC9-210ENST00000521667 TAF11Q15544 211 aa18.03■□□□□ 0.48
TRAPPC9-210ENST00000521667 MUM1Q2TAK8 710 aa18.03■□□□□ 0.48
TRAPPC9-210ENST00000521667 EP400NLQ6ZTU2 488 aa18.03■□□□□ 0.48
TRAPPC9-210ENST00000521667 LILRA3Q8N6C8 439 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC9-210ENST00000521667 USP7Q93009 1102 aa18.03■□□□□ 0.48
TRAPPC9-210ENST00000521667 PYCR2Q96C36 320 aa18.03■□□□□ 0.48
TRAPPC9-210ENST00000521667 ASB9Q96DX5 294 aa18.03■□□□□ 0.48
TRAPPC9-210ENST00000521667 RPP25Q9BUL9 199 aaKnown RBP18.03■□□□□ 0.48
TRAPPC9-210ENST00000521667 OR2AG1Q9H205 316 aa18.03■□□□□ 0.48
TRAPPC9-210ENST00000521667 FARSBQ9NSD9 589 aaKnown RBP18.03■□□□□ 0.48
TRAPPC9-210ENST00000521667 DNAJC11Q9NVH1 559 aa18.03■□□□□ 0.48
TRAPPC9-210ENST00000521667 GID8Q9NWU2 228 aa18.03■□□□□ 0.48
TRAPPC9-210ENST00000521667 FAM234BA2RU67 622 aa18.02■□□□□ 0.48
TRAPPC9-210ENST00000521667 KRT6AP02538 564 aa18.02■□□□□ 0.48
TRAPPC9-210ENST00000521667 KRT6BP04259 564 aa18.02■□□□□ 0.48
TRAPPC9-210ENST00000521667 PBLDP30039 288 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC9-210ENST00000521667 MAPK9P45984 424 aa18.02■□□□□ 0.48
TRAPPC9-210ENST00000521667 KRT6CP48668 564 aa18.02■□□□□ 0.48
TRAPPC9-210ENST00000521667 POLR2JP52435 117 aaKnown RBP18.02■□□□□ 0.48
TRAPPC9-210ENST00000521667 SMU1Q2TAY7 513 aa18.02■□□□□ 0.48
TRAPPC9-210ENST00000521667 GGTA1PQ4G0N0 100 aa18.02■□□□□ 0.48
TRAPPC9-210ENST00000521667 RFTN2Q52LD8 501 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC9-210ENST00000521667 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.02■□□□□ 0.48
TRAPPC9-210ENST00000521667 SAMD4BQ5PRF9 694 aaKnown RBP18.02■□□□□ 0.48
TRAPPC9-210ENST00000521667 PIP5KL1Q5T9C9 394 aa18.02■□□□□ 0.48
TRAPPC9-210ENST00000521667 PRMT9Q6P2P2 845 aa18.02■□□□□ 0.48
TRAPPC9-210ENST00000521667 NEK5Q6P3R8 708 aa18.02■□□□□ 0.48
TRAPPC9-210ENST00000521667 DHDDSQ86SQ9 333 aa18.02■□□□□ 0.48
TRAPPC9-210ENST00000521667 SLC22A15Q8IZD6 547 aa18.02■□□□□ 0.48
TRAPPC9-210ENST00000521667 FAM156AQ8NDB6 213 aa18.02■□□□□ 0.48
TRAPPC9-210ENST00000521667 BHLHE22Q8NFJ8 381 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC9-210ENST00000521667 DNAJC9Q8WXX5 260 aa18.02■□□□□ 0.48
TRAPPC9-210ENST00000521667 SLC39A3Q9BRY0 314 aa18.02■□□□□ 0.48
TRAPPC9-210ENST00000521667 PRO3102Q9H379 93 aa18.02■□□□□ 0.48
TRAPPC9-210ENST00000521667 CD300AQ9UGN4 299 aa18.02■□□□□ 0.48
TRAPPC9-210ENST00000521667 KRT87PA6NCN2 255 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 PRORSD1PA6NEY8 169 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 H3BNX3 289 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 ARNTLO00327 626 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 CATP04040 527 aaKnown RBP18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 G6PDP11413 515 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 SLC7A2P52569 658 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 ENPP2Q13822 863 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 TRIM25Q14258 630 aaKnown RBP18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 ZNF658BQ4V348 819 aaPredicted RBP18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 IL23RQ5VWK5 629 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 CHPFQ8IZ52 775 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 MINDY1Q8N5J2 469 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 PROKR1Q8TCW9 393 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 RIPOR3Q96MK2 946 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 ZNF570Q96NI8 536 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 ATG10Q9H0Y0 220 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 IL1RL2Q9HB29 575 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 TRIM39Q9HCM9 518 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 ZNHIT2Q9UHR6 403 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 SLC22A14Q9Y267 594 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 POLR3HQ9Y535 204 aaPredicted RBP18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 CCDC154A6NI56 674 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 MAP3K7O43318 606 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 LILRB5O75023 590 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 EEDO75530 441 aaKnown RBP18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 SLC2A4P14672 509 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 ITPKAP23677 461 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 IL12AP29459 219 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 WASP42768 502 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 RPL38P63173 70 aaKnown RBP18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 PRKG2Q13237 762 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 MAD2L1Q13257 205 aaPredicted RBP18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 GTF2H3Q13889 308 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 CPSF6Q16630 551 aaKnown RBP eCLIP18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 IMPG1Q17R60 797 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 SGO1Q5FBB7 561 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 CYP20A1Q6UW02 462 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 RNF111Q6ZNA4 994 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 TRAPPC5Q8IUR0 188 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 ATL1Q8WXF7 558 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 VPS33AQ96AX1 596 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 LRCH3Q96II8 777 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 FOPNLQ96NB1 174 aa18.01■□□□□ 0.47
TRAPPC9-210ENST00000521667 KCNE1BA0A087WTH5 132 aa18■□□□□ 0.47
TRAPPC9-210ENST00000521667 FXYD1O00168 92 aa18■□□□□ 0.47
TRAPPC9-210ENST00000521667 LIN7AO14910 233 aaPredicted RBP18■□□□□ 0.47
TRAPPC9-210ENST00000521667 RPSAP08865 295 aaKnown RBP18■□□□□ 0.47
TRAPPC9-210ENST00000521667 DRD3P35462 400 aa18■□□□□ 0.47
TRAPPC9-210ENST00000521667 GNPDA1P46926 289 aa18■□□□□ 0.47
TRAPPC9-210ENST00000521667 SOX9P48436 509 aa18■□□□□ 0.47
TRAPPC9-210ENST00000521667 PFN3P60673 137 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms