RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 EEF2KMTQ96G04 330 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 IGSF21Q96ID5 467 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 ANKRD36BP1Q96IX9 119 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 CNOT6LQ96LI5 555 aaKnown RBP3.26□□□□□ -1.89
VPS13B-209ENST00000521559 TBATAQ96M53 351 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 NPLQ9BXD5 320 aaPredicted RBP3.26□□□□□ -1.89
VPS13B-209ENST00000521559 MTMR12Q9C0I1 747 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 LMAN2LQ9H0V9 348 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 TSPY26PQ9H489 355 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 PLSCR4Q9NRQ2 329 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 RASSF1Q9NS23 344 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 SAMSN1Q9NSI8 373 aaKnown RBP3.26□□□□□ -1.89
VPS13B-209ENST00000521559 MARCH5Q9NX47 278 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 DNAJB4Q9UDY4 337 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 TUBGCP4Q9UGJ1 667 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 ITGA11Q9UKX5 1188 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 AGO1Q9UL18 857 aaKnown RBP3.26□□□□□ -1.89
VPS13B-209ENST00000521559 PAM16Q9Y3D7 125 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 NFE2L3Q9Y4A8 694 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 CLDN16Q9Y5I7 305 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 FRMPD3Q5JV73 1810 aa3.26□□□□□ -1.89
VPS13B-209ENST00000521559 PTPRJQ12913 1337 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 DOCK5Q9H7D0 1870 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 PLSCR5A0PG75 271 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 ARHGEF37A1IGU5 675 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 IFITM10A6NMD0 228 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 KPNA7A9QM74 516 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 B9A039 149 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 P4HA2O15460 535 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 TRAPPC3O43617 180 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 N4BP1O75113 896 aaKnown RBP3.25□□□□□ -1.89
VPS13B-209ENST00000521559 ZBTB11O95625 1053 aaPredicted RBP3.25□□□□□ -1.89
VPS13B-209ENST00000521559 CXCL14O95715 111 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 HLA-DRAP01903 254 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 TPM2P07951 284 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 KRT19P08727 400 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 TRIM49P0CI25 452 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 TRIM49CP0CI26 452 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 CKMT1AP12532 417 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 ZNF18P17022 549 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 MYF6P23409 242 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 CTNNB1P35222 781 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 PBX3P40426 434 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 MTIF2P46199 727 aaKnown RBP3.25□□□□□ -1.89
VPS13B-209ENST00000521559 BRCC3P46736 316 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 TAF6P49848 677 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 MYL6P60660 151 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 ADORA2A-AS1P86434 159 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 CETN1Q12798 172 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 GPM6BQ13491 265 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 TRPC3Q13507 836 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 SLC12A1Q13621 1099 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 IL13RA2Q14627 380 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 KRT31Q15323 416 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 SGSM1Q2NKQ1 1148 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 TCP11X2Q5H9J9 407 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 KRT39Q6A163 491 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 FUT10Q6P4F1 479 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 KLHL24Q6TFL4 600 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 DSTYKQ6XUX3 929 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.25□□□□□ -1.89
VPS13B-209ENST00000521559 CUZD1Q86UP6 607 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 TRIM74Q86UV6 250 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 TRIM73Q86UV7 250 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 LUZP1Q86V48 1076 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 TMEM173Q86WV6 379 aaPredicted RBP3.25□□□□□ -1.89
VPS13B-209ENST00000521559 CREBRFQ8IUR6 639 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 GPR65Q8IYL9 337 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 RNF168Q8IYW5 571 aaPredicted RBP3.25□□□□□ -1.89
VPS13B-209ENST00000521559 MRPL43Q8N983 215 aaKnown RBP3.25□□□□□ -1.89
VPS13B-209ENST00000521559 APPL2Q8NEU8 664 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 ANKRD20A12PQ8NF67 263 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 SPATA18Q8TC71 538 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 TMED6Q8WW62 240 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 ARNTL2Q8WYA1 636 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 TAF4BQ92750 862 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 SEMA4DQ92854 862 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 HPDLQ96IR7 371 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 TXNDC15Q96J42 360 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 SENP8Q96LD8 212 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 ZNF560Q96MR9 790 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 COG8Q96MW5 612 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 TUBGCP2Q9BSJ2 902 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 HERC2P3Q9BVR0 1158 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 C1QTNF4Q9BXJ3 329 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 TWSG1Q9GZX9 223 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 LHPPQ9H008 270 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 HSD3B7Q9H2F3 369 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 TTYH1Q9H313 450 aaPredicted RBP3.25□□□□□ -1.89
VPS13B-209ENST00000521559 ENTPD7Q9NQZ7 604 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 RAB20Q9NX57 234 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 GDAP2Q9NXN4 497 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 CACNG4Q9UBN1 327 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 STK39Q9UEW8 545 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 LIMA1Q9UHB6 759 aaKnown RBP3.25□□□□□ -1.89
VPS13B-209ENST00000521559 SIX4Q9UIU6 781 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 ADAM28Q9UKQ2 775 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 MTUS1Q9ULD2 1270 aa3.25□□□□□ -1.89
VPS13B-209ENST00000521559 PRG3Q9Y2Y8 225 aaPredicted RBP3.25□□□□□ -1.89
VPS13B-209ENST00000521559 COQ4Q9Y3A0 265 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms