RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 ANPEPP15144 967 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 XRCC1P18887 633 aaPredicted RBP18.01■□□□□ 0.47
FAM49B-214ENST00000519540 PDHA2P29803 388 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 TAS2R38P59533 333 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 UFM1P61960 85 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 AP5B1Q2VPB7 878 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 C2orf27AQ580R0 203 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 AGBL4Q5VU57 503 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 LAYNQ6UX15 382 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 PLA2G15Q8NCC3 412 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 USP7Q93009 1102 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 SLC45A3Q96JT2 553 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 ATG10Q9H0Y0 220 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 ZIM2Q9NZV7 527 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 ZNHIT2Q9UHR6 403 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 ZNF490Q9ULM2 529 aaPredicted RBP18.01■□□□□ 0.47
FAM49B-214ENST00000519540 SLC22A14Q9Y267 594 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 RGS14O43566 566 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 AP1G1O43747 822 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 MSX2P35548 267 aaPredicted RBP18.01■□□□□ 0.47
FAM49B-214ENST00000519540 SEC13P55735 322 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 PFN3P60673 137 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 RFTN2Q52LD8 501 aaPredicted RBP18.01■□□□□ 0.47
FAM49B-214ENST00000519540 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.01■□□□□ 0.47
FAM49B-214ENST00000519540 CACUL1Q86Y37 369 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 TRAPPC5Q8IUR0 188 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 HIPK4Q8NE63 616 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 NRG4Q8WWG1 115 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 FOXJ1Q92949 421 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 ZNF514Q96K75 400 aaPredicted RBP18.01■□□□□ 0.47
FAM49B-214ENST00000519540 MSLNLQ96KJ4 702 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 PPP3R2Q96LZ3 170 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 ZNF576Q9H609 170 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 DNAJC11Q9NVH1 559 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 TMEM45AQ9NWC5 275 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 ANGPTL2Q9UKU9 493 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 CKAP5Q14008 2032 aa18.01■□□□□ 0.47
FAM49B-214ENST00000519540 ZFC3H1O60293 1989 aaKnown RBP18■□□□□ 0.47
FAM49B-214ENST00000519540 IGLON5A6NGN9 336 aa18■□□□□ 0.47
FAM49B-214ENST00000519540 TRIM38O00635 465 aa18■□□□□ 0.47
FAM49B-214ENST00000519540 LIN7AO14910 233 aaPredicted RBP18■□□□□ 0.47
FAM49B-214ENST00000519540 ANGPT2O15123 496 aa18■□□□□ 0.47
FAM49B-214ENST00000519540 CATP04040 527 aaKnown RBP18■□□□□ 0.47
FAM49B-214ENST00000519540 C5AR1P21730 350 aa18■□□□□ 0.47
FAM49B-214ENST00000519540 BMP8BP34820 402 aa18■□□□□ 0.47
FAM49B-214ENST00000519540 TIE1P35590 1138 aa18■□□□□ 0.47
FAM49B-214ENST00000519540 MAPK9P45984 424 aa18■□□□□ 0.47
FAM49B-214ENST00000519540 MS4A2Q01362 244 aa18■□□□□ 0.47
FAM49B-214ENST00000519540 HTR4Q13639 388 aa18■□□□□ 0.47
FAM49B-214ENST00000519540 RCAN2Q14206 197 aa18■□□□□ 0.47
FAM49B-214ENST00000519540 CPSF6Q16630 551 aaKnown RBP eCLIP18■□□□□ 0.47
FAM49B-214ENST00000519540 GGTA1PQ4G0N0 100 aa18■□□□□ 0.47
FAM49B-214ENST00000519540 COQ5Q5HYK3 327 aa18■□□□□ 0.47
FAM49B-214ENST00000519540 KBTBD6Q86V97 674 aa18■□□□□ 0.47
FAM49B-214ENST00000519540 ZNF547Q8IVP9 402 aa18■□□□□ 0.47
FAM49B-214ENST00000519540 CFAP206Q8IYR0 622 aa18■□□□□ 0.47
FAM49B-214ENST00000519540 PROKR1Q8TCW9 393 aa18■□□□□ 0.47
FAM49B-214ENST00000519540 PYDC1Q8WXC3 89 aa18■□□□□ 0.47
FAM49B-214ENST00000519540 SPDL1Q96EA4 605 aa18■□□□□ 0.47
FAM49B-214ENST00000519540 HIC2Q96JB3 615 aa18■□□□□ 0.47
FAM49B-214ENST00000519540 CCDC138Q96M89 665 aa18■□□□□ 0.47
FAM49B-214ENST00000519540 SPAG4Q9NPE6 437 aa18■□□□□ 0.47
FAM49B-214ENST00000519540 LMCD1Q9NZU5 365 aa18■□□□□ 0.47
FAM49B-214ENST00000519540 EPS15L1Q9UBC2 864 aa18■□□□□ 0.47
FAM49B-214ENST00000519540 GPR34Q9UPC5 381 aa18■□□□□ 0.47
FAM49B-214ENST00000519540 A0A1W2PP18 115 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 H3BM21 787 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 VEGFDO43915 354 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 ADH1BP00325 375 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 KRT6AP02538 564 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 KRT6BP04259 564 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 ZNF8P17098 575 aaPredicted RBP17.99■□□□□ 0.47
FAM49B-214ENST00000519540 ITPKAP23677 461 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 KRT6CP48668 564 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 POLR2JP52435 117 aaKnown RBP17.99■□□□□ 0.47
FAM49B-214ENST00000519540 KCNK10P57789 538 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 GTF2H3Q13889 308 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 SMU1Q2TAY7 513 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 SGO1Q5FBB7 561 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 IL23RQ5VWK5 629 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 ADAMTSL4Q6UY14 1074 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 L3MBTL4Q8NA19 623 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 CSGALNACT1Q8TDX6 532 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 LINC00615Q96LM1 132 aaPredicted RBP17.99■□□□□ 0.47
FAM49B-214ENST00000519540 FOPNLQ96NB1 174 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 GPATCH1Q9BRR8 931 aaKnown RBP17.99■□□□□ 0.47
FAM49B-214ENST00000519540 MRPL40Q9NQ50 206 aaKnown RBP17.99■□□□□ 0.47
FAM49B-214ENST00000519540 TMEM181Q9P2C4 612 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 TICRRQ7Z2Z1 1910 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 KCNE1BA0A087WTH5 132 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 C17orf113A0A1B0GUU1 675 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 ANHXE9PGG2 379 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 ACOT8O14734 319 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 PRAMEF4O60810 478 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 G6PDP11413 515 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 SLC2A4P14672 509 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 IL12AP29459 219 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 CCSMST1Q4G0I0 132 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 PRAMEF9Q5VWM5 478 aa17.99■□□□□ 0.47
FAM49B-214ENST00000519540 PNCKQ6P2M8 343 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms