RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 IFNGR2P38484 337 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 DAG1Q14118 895 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 TGFBIQ15582 683 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 ZNF792Q3KQV3 632 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 RNF44Q7L0R7 432 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 YTHDF1Q9BYJ9 559 aaKnown RBP10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 HDHD2Q9H0R4 259 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 EQTNQ9NQ60 294 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 ADAMTS5Q9UNA0 930 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 ANGPT4Q9Y264 503 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 OR10H1Q9Y4A9 318 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 PLOD2O00469 737 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 ACOT8O14734 319 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 EDNRBP24530 442 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 COPZ1P61923 177 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 AP1S1P61966 158 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 ZNF678Q5SXM1 525 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 PDZK1Q5T2W1 519 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 TMC5Q6UXY8 1006 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 NCCRP1Q6ZVX7 275 aaPredicted RBP10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 LUZP2Q86TE4 346 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 ALDH16A1Q8IZ83 802 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 ZNF366Q8N895 744 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 ST13P5Q8NFI4 369 aaPredicted RBP10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 SLC45A3Q96JT2 553 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 SUSD3Q96L08 255 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 MIOSQ9NXC5 875 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 TMEM9Q9P0T7 183 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 WDR37Q9Y2I8 494 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 EFCAB10A6NFE3 127 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 TPD52L2O43399 206 aaKnown RBP10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 MTX2O75431 263 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 RASAL1O95294 804 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 ESR1P03372 595 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 DBTP11182 482 aaKnown RBP10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 IL7RP16871 459 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 PSMD8P48556 350 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 CSNK2BP67870 215 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 PTSQ03393 145 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 GTF2H2Q13888 395 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 LRP8Q14114 963 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 CBX2Q14781 532 aaPredicted RBP10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 C9orf64Q5T6V5 341 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 GTF2H2CQ6P1K8 395 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 ZNF773Q6PK81 442 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 CMTR2Q8IYT2 770 aaKnown RBP10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 LSMEM2Q8N112 164 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 OR4A15Q8NGL6 344 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 OR14C36Q8NHC7 312 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 CAPSLQ8WWF8 208 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 TFAP2CQ92754 450 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 KHSRPQ92945 711 aaKnown RBP eCLIP10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 CDK15Q96Q40 435 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 DEPDC7Q96QD5 511 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 NODALQ96S42 347 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 OLFM1Q99784 485 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 POLR3BQ9NW08 1133 aaPredicted RBP10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 CACNB4O00305 520 aaPredicted RBP10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 NME4O00746 187 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 ZW10O43264 779 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 AOC2O75106 756 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 TULP3O75386 442 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 CLPXO76031 633 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 ANXA4P09525 319 aaPredicted RBP10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 ALPIP09923 528 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 COL6A1P12109 1028 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 GGT5P36269 586 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 PTGER3P43115 390 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 ACADVLP49748 655 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 ATP4BP51164 291 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 TRIM32Q13049 653 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 GRB7Q14451 532 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 SLC9A5Q14940 896 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 ADGRF1Q5T601 910 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 CLDN19Q8N6F1 224 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 TMBIM1Q969X1 311 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 BIRC7Q96CA5 298 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 CRTAC1Q9NQ79 661 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 TOR4AQ9NXH8 423 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 HS3ST4Q9Y661 456 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 TCRBV3S1A0A5B6 114 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 H3BMQ9 156 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 GSRP00390 522 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 KCNE1P15382 129 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 PORP16435 677 aaPredicted RBP10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 CCND3P30281 292 aaPredicted RBP10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 GNA13Q14344 377 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 CARTPTQ16568 116 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 PKDCCQ504Y2 493 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 NIPAL1Q6NVV3 410 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 UTS2BQ765I0 119 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 R3HCC1LQ7Z5L2 792 aaKnown RBP10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 POC5Q8NA72 575 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 CDKN2AIPNLQ96HQ2 116 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 COG8Q96MW5 612 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 MUS81Q96NY9 551 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 RANBP9Q96S59 729 aa10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 MTERF1Q99551 399 aaKnown RBP10.63□□□□□ -0.71
PCDHGA1-202ENST00000517417 NPLQ9BXD5 320 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms