RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.1■□□□□ 0.33
SFXN1-212ENST00000515791 CHRNA10Q9GZZ6 450 aa17.1■□□□□ 0.33
SFXN1-212ENST00000515791 CHST8Q9H2A9 424 aa17.1■□□□□ 0.33
SFXN1-212ENST00000515791 PCMTD2Q9NV79 361 aa17.1■□□□□ 0.33
SFXN1-212ENST00000515791 POLG2Q9UHN1 485 aa17.1■□□□□ 0.33
SFXN1-212ENST00000515791 POLHQ9Y253 713 aa17.1■□□□□ 0.33
SFXN1-212ENST00000515791 FARSAQ9Y285 508 aaKnown RBP17.1■□□□□ 0.33
SFXN1-212ENST00000515791 PPP2R2CQ9Y2T4 447 aa17.1■□□□□ 0.33
SFXN1-212ENST00000515791 HEMK1Q9Y5R4 338 aaPredicted RBP17.1■□□□□ 0.33
SFXN1-212ENST00000515791 SPTA1P02549 2419 aa17.1■□□□□ 0.33
SFXN1-212ENST00000515791 SETXQ7Z333 2677 aaKnown RBP17.1■□□□□ 0.33
SFXN1-212ENST00000515791 PIPSLA2A3N6 862 aa17.09■□□□□ 0.33
SFXN1-212ENST00000515791 MEN1O00255 615 aa17.09■□□□□ 0.33
SFXN1-212ENST00000515791 CEP104O60308 925 aa17.09■□□□□ 0.33
SFXN1-212ENST00000515791 WISP1O95388 367 aa17.09■□□□□ 0.33
SFXN1-212ENST00000515791 CTSBP07858 339 aa17.09■□□□□ 0.33
SFXN1-212ENST00000515791 UGT2B7P16662 529 aa17.09■□□□□ 0.33
SFXN1-212ENST00000515791 AOAHP28039 575 aa17.09■□□□□ 0.33
SFXN1-212ENST00000515791 SHMT2P34897 504 aa17.09■□□□□ 0.33
SFXN1-212ENST00000515791 MAGEA6P43360 314 aa17.09■□□□□ 0.33
SFXN1-212ENST00000515791 NPY2RP49146 381 aa17.09■□□□□ 0.33
SFXN1-212ENST00000515791 IL10RAQ13651 578 aa17.09■□□□□ 0.33
SFXN1-212ENST00000515791 TTC27Q6P3X3 843 aa17.09■□□□□ 0.33
SFXN1-212ENST00000515791 ATG14Q6ZNE5 492 aa17.09■□□□□ 0.33
SFXN1-212ENST00000515791 APLFQ8IW19 511 aaPredicted RBP17.09■□□□□ 0.33
SFXN1-212ENST00000515791 RASGEF1CQ8N431 466 aa17.09■□□□□ 0.33
SFXN1-212ENST00000515791 C9orf43Q8TAL5 461 aaPredicted RBP17.09■□□□□ 0.33
SFXN1-212ENST00000515791 ADAMTS17Q8TE56 1095 aa17.09■□□□□ 0.33
SFXN1-212ENST00000515791 MAIP1Q8WWC4 291 aa17.09■□□□□ 0.33
SFXN1-212ENST00000515791 KIFC1Q9BW19 673 aa17.09■□□□□ 0.33
SFXN1-212ENST00000515791 TRIM4Q9C037 500 aa17.09■□□□□ 0.33
SFXN1-212ENST00000515791 IL22Q9GZX6 179 aa17.09■□□□□ 0.33
SFXN1-212ENST00000515791 CATSPERZQ9NTU4 200 aa17.09■□□□□ 0.33
SFXN1-212ENST00000515791 OR6C2Q9NZP2 312 aa17.09■□□□□ 0.33
SFXN1-212ENST00000515791 PLAGL1Q9UM63 463 aa17.09■□□□□ 0.33
SFXN1-212ENST00000515791 PCSK5Q92824 1860 aa17.09■□□□□ 0.33
SFXN1-212ENST00000515791 SNRNP200O75643 2136 aaKnown RBP17.08■□□□□ 0.33
SFXN1-212ENST00000515791 CDC14CA4D256 554 aa17.08■□□□□ 0.32
SFXN1-212ENST00000515791 TMEM150CB9EJG8 249 aa17.08■□□□□ 0.32
SFXN1-212ENST00000515791 CD3EAPO15446 510 aaKnown RBP17.08■□□□□ 0.32
SFXN1-212ENST00000515791 SLCO2B1O94956 709 aa17.08■□□□□ 0.32
SFXN1-212ENST00000515791 TPSB2P20231 275 aa17.08■□□□□ 0.32
SFXN1-212ENST00000515791 BASP1P80723 227 aaKnown RBP17.08■□□□□ 0.32
SFXN1-212ENST00000515791 KCNJ11Q14654 390 aa17.08■□□□□ 0.32
SFXN1-212ENST00000515791 TPSAB1Q15661 275 aa17.08■□□□□ 0.32
SFXN1-212ENST00000515791 KYNUQ16719 465 aa17.08■□□□□ 0.32
SFXN1-212ENST00000515791 UGT8Q16880 541 aa17.08■□□□□ 0.32
SFXN1-212ENST00000515791 SYTL3Q4VX76 610 aa17.08■□□□□ 0.32
SFXN1-212ENST00000515791 LRRC8BQ6P9F7 803 aa17.08■□□□□ 0.32
SFXN1-212ENST00000515791 SYVN1Q86TM6 617 aa17.08■□□□□ 0.32
SFXN1-212ENST00000515791 KRT222Q8N1A0 295 aa17.08■□□□□ 0.32
SFXN1-212ENST00000515791 LINC01555Q8NAE3 123 aa17.08■□□□□ 0.32
SFXN1-212ENST00000515791 CPT1BQ92523 772 aa17.08■□□□□ 0.32
SFXN1-212ENST00000515791 TTC1Q99614 292 aa17.08■□□□□ 0.32
SFXN1-212ENST00000515791 MRM3Q9HC36 420 aaKnown RBP17.08■□□□□ 0.32
SFXN1-212ENST00000515791 ZNF71Q9NQZ8 489 aaPredicted RBP17.08■□□□□ 0.32
SFXN1-212ENST00000515791 SYBUQ9NX95 663 aa17.08■□□□□ 0.32
SFXN1-212ENST00000515791 TDRKHQ9Y2W6 561 aaKnown RBP17.08■□□□□ 0.32
SFXN1-212ENST00000515791 NEU2Q9Y3R4 380 aa17.08■□□□□ 0.32
SFXN1-212ENST00000515791 FER1L5A0AVI2 2057 aa17.08■□□□□ 0.32
SFXN1-212ENST00000515791 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.07■□□□□ 0.32
SFXN1-212ENST00000515791 PRMT5O14744 637 aaPredicted RBP17.07■□□□□ 0.32
SFXN1-212ENST00000515791 RAB40ALP0C0E4 278 aa17.07■□□□□ 0.32
SFXN1-212ENST00000515791 MGAT1P26572 445 aa17.07■□□□□ 0.32
SFXN1-212ENST00000515791 PKLRP30613 574 aa17.07■□□□□ 0.32
SFXN1-212ENST00000515791 PMS2P54278 862 aa17.07■□□□□ 0.32
SFXN1-212ENST00000515791 CSE1LP55060 971 aaKnown RBP17.07■□□□□ 0.32
SFXN1-212ENST00000515791 CDK16Q00536 496 aa17.07■□□□□ 0.32
SFXN1-212ENST00000515791 HSPA14Q0VDF9 509 aa17.07■□□□□ 0.32
SFXN1-212ENST00000515791 DNAJC21Q5F1R6 531 aaKnown RBP17.07■□□□□ 0.32
SFXN1-212ENST00000515791 AARS2Q5JTZ9 985 aaKnown RBP17.07■□□□□ 0.32
SFXN1-212ENST00000515791 FAM198BQ6UWH4 519 aa17.07■□□□□ 0.32
SFXN1-212ENST00000515791 C19orf47Q8N9M1 422 aaKnown RBP17.07■□□□□ 0.32
SFXN1-212ENST00000515791 LMNTD1Q8N9Z9 388 aa17.07■□□□□ 0.32
SFXN1-212ENST00000515791 MR1Q95460 341 aa17.07■□□□□ 0.32
SFXN1-212ENST00000515791 MFSD3Q96ES6 412 aa17.07■□□□□ 0.32
SFXN1-212ENST00000515791 BIRC8Q96P09 236 aa17.07■□□□□ 0.32
SFXN1-212ENST00000515791 TRIM55Q9BYV6 548 aa17.07■□□□□ 0.32
SFXN1-212ENST00000515791 ACTR5Q9H9F9 607 aaPredicted RBP17.07■□□□□ 0.32
SFXN1-212ENST00000515791 FANCEQ9HB96 536 aa17.07■□□□□ 0.32
SFXN1-212ENST00000515791 BFARQ9NZS9 450 aa17.07■□□□□ 0.32
SFXN1-212ENST00000515791 TP53TG5Q9Y2B4 290 aa17.07■□□□□ 0.32
SFXN1-212ENST00000515791 ZNF749O43361 778 aa17.06■□□□□ 0.32
SFXN1-212ENST00000515791 PDGFAP04085 211 aa17.06■□□□□ 0.32
SFXN1-212ENST00000515791 NR1D1P20393 614 aa17.06■□□□□ 0.32
SFXN1-212ENST00000515791 RPS3P23396 243 aaKnown RBP eCLIP17.06■□□□□ 0.322e-6■□□□□ 9.4
SFXN1-212ENST00000515791 GCGRP47871 477 aa17.06■□□□□ 0.32
SFXN1-212ENST00000515791 TTPAP49638 278 aa17.06■□□□□ 0.32
SFXN1-212ENST00000515791 CSRP3P50461 194 aa17.06■□□□□ 0.32
SFXN1-212ENST00000515791 ITGA1P56199 1179 aa17.06■□□□□ 0.32
SFXN1-212ENST00000515791 RPS15P62841 145 aaKnown RBP17.06■□□□□ 0.32
SFXN1-212ENST00000515791 SLC5A12Q1EHB4 618 aa17.06■□□□□ 0.32
SFXN1-212ENST00000515791 CTSL3PQ5NE16 218 aa17.06■□□□□ 0.32
SFXN1-212ENST00000515791 FAM69BQ5VUD6 431 aa17.06■□□□□ 0.32
SFXN1-212ENST00000515791 CES3Q6UWW8 571 aa17.06■□□□□ 0.32
SFXN1-212ENST00000515791 GSTA5Q7RTV2 222 aa17.06■□□□□ 0.32
SFXN1-212ENST00000515791 CAND1Q86VP6 1230 aaKnown RBP17.06■□□□□ 0.32
SFXN1-212ENST00000515791 MPP5Q8N3R9 675 aa17.06■□□□□ 0.32
SFXN1-212ENST00000515791 DNAJC22Q8N4W6 341 aa17.06■□□□□ 0.32
SFXN1-212ENST00000515791 ASZ1Q8WWH4 475 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms