RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 RARRES3Q9UL19 164 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 TMEM184BQ9Y519 407 aaPredicted RBP11.14□□□□□ -0.63
VCAN-212ENST00000515397 RPS6KL1Q9Y6S9 549 aa11.14□□□□□ -0.63
VCAN-212ENST00000515397 ZCWPW2A0A1B0GU75 182 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 PIPSLA2A3N6 862 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 CES2O00748 559 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 HCRTR1O43613 425 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 C1QL1O75973 258 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 ZBTB11O95625 1053 aaPredicted RBP11.13□□□□□ -0.63
VCAN-212ENST00000515397 APOA4P06727 396 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 CHRM5P08912 532 aaPredicted RBP11.13□□□□□ -0.63
VCAN-212ENST00000515397 GSTM1P09488 218 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 FAM87AP0C7U9 286 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 UGT2B7P16662 529 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 TCP1P17987 556 aaKnown RBP11.13□□□□□ -0.63
VCAN-212ENST00000515397 CHRM3P20309 590 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 MAP4P27816 1152 aaKnown RBP11.13□□□□□ -0.63
VCAN-212ENST00000515397 PEBP1P30086 187 aaKnown RBP11.13□□□□□ -0.63
VCAN-212ENST00000515397 DLSTP36957 453 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 BDKRB1P46663 353 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 GSTM4Q03013 218 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 ZIC1Q15915 447 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 TBR1Q16650 682 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 RNASEH2BQ5TBB1 312 aaKnown RBP11.13□□□□□ -0.63
VCAN-212ENST00000515397 IZUMO3Q5VZ72 239 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 KIAA0930Q6ICG6 404 aaPredicted RBP11.13□□□□□ -0.63
VCAN-212ENST00000515397 MRNIPQ6NTE8 343 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 IGDCC3Q8IVU1 814 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 PPIL6Q8IXY8 311 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 TBC1D21Q8IYX1 336 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 SLC22A15Q8IZD6 547 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 ZSCAN1Q8NBB4 408 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 SLC38A9Q8NBW4 561 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 OR1L3Q8NH93 324 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 OR5K2Q8NHB8 316 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 GRK7Q8WTQ7 553 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 ASZ1Q8WWH4 475 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 LPGAT1Q92604 370 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 ZNF501Q96CX3 271 aaPredicted RBP11.13□□□□□ -0.63
VCAN-212ENST00000515397 STAMBPL1Q96FJ0 436 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 TRAPPC9Q96Q05 1148 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 OR2A14Q96R47 310 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 CD180Q99467 661 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 SLC30A3Q99726 388 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 TRIM51Q9BSJ1 452 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 TRIM31Q9BZY9 425 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 FAM60AQ9NP50 221 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 KCND1Q9NSA2 647 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 C20orf96Q9NUD7 363 aaPredicted RBP11.13□□□□□ -0.63
VCAN-212ENST00000515397 GNPTGQ9UJJ9 305 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 CROTQ9UKG9 612 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 SAR1BQ9Y6B6 198 aa11.13□□□□□ -0.63
VCAN-212ENST00000515397 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.13□□□□□ -0.63
VCAN-212ENST00000515397 SEC16AO15027 2179 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 SPTA1P02549 2419 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 FAM237BA0A1B0GVD1 139 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 CTAGE9A4FU28 777 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 C2orf74A8MZ97 194 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 ISM1B1AKI9 464 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 TMEM150CB9EJG8 249 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 ERVH48-1M5A8F1 160 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 SLCO2B1O94956 709 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 S1PR4O95977 384 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 MLNP12872 115 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 IVDP26440 423 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 STAT5AP42229 794 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 MAGEA3P43357 314 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 MPP1Q00013 466 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 ACY1Q03154 408 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 DHX9Q08211 1270 aaKnown RBP11.12□□□□□ -0.63
VCAN-212ENST00000515397 ABHD18Q0P651 414 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 THOC5Q13769 683 aaKnown RBP11.12□□□□□ -0.63
VCAN-212ENST00000515397 GRB7Q14451 532 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 DEFB110Q30KQ9 67 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 BBS9Q3SYG4 887 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.12□□□□□ -0.63
VCAN-212ENST00000515397 HSP90AA5PQ58FG0 334 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 ACSBG2Q5FVE4 666 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 FAM69BQ5VUD6 431 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 ZNF470Q6ECI4 717 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 LCN10Q6JVE6 187 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 CNSTQ6PJW8 725 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 SPESP1Q6UW49 350 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 CDHR3Q6ZTQ4 885 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 OTOAQ7RTW8 1153 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 TMEM135Q86UB9 458 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 CILP2Q8IUL8 1156 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 ESX1Q8N693 406 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 LINC01555Q8NAE3 123 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 FLVCR1-AS1Q8TAF5 88 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 XAB2Q9HCS7 855 aaKnown RBP11.12□□□□□ -0.63
VCAN-212ENST00000515397 C1GALT1Q9NS00 363 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 SLC17A6Q9P2U8 582 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 ZNF462Q96JM2 2506 aa11.12□□□□□ -0.63
VCAN-212ENST00000515397 MAGEB16A2A368 324 aa11.11□□□□□ -0.63
VCAN-212ENST00000515397 F8W8V4 182 aa11.11□□□□□ -0.63
VCAN-212ENST00000515397 DNALI1O14645 258 aaPredicted RBP11.11□□□□□ -0.63
VCAN-212ENST00000515397 TTI1O43156 1089 aa11.11□□□□□ -0.63
VCAN-212ENST00000515397 SCRG1O75711 98 aa11.11□□□□□ -0.63
VCAN-212ENST00000515397 HAUS5O94927 633 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms