RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 TTC23LQ6PF05 361 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 ISCA2Q86U28 154 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 EXOC3L1Q86VI1 746 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 C4orf33Q8N1A6 199 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 PHC3Q8NDX5 983 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 OR6C4Q8NGE1 309 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 RHEBL1Q8TAI7 183 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 SH3KBP1Q96B97 665 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 PTERQ96BW5 349 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 TLCD1Q96CP7 247 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 APOPT1Q96IL0 206 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 APOLD1Q96LR9 279 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 KIR3DX1Q9H7L2 352 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 UCK1Q9HA47 277 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 SSU72Q9NP77 194 aaKnown RBP20.43■□□□□ 0.86
LSM6-207ENST00000515311 GVINP1Q7Z2Y8 2422 aa20.43■□□□□ 0.86
LSM6-207ENST00000515311 FAM186AA6NE01 2351 aa20.42■□□□□ 0.86
LSM6-207ENST00000515311 MYO1CO00159 1063 aa20.42■□□□□ 0.86
LSM6-207ENST00000515311 COPEO14579 308 aa20.42■□□□□ 0.86
LSM6-207ENST00000515311 NUDT21O43809 227 aaKnown RBP20.42■□□□□ 0.86
LSM6-207ENST00000515311 KDM1AO60341 852 aa20.42■□□□□ 0.86
LSM6-207ENST00000515311 GDF9O60383 454 aa20.42■□□□□ 0.86
LSM6-207ENST00000515311 GFRA3O60609 400 aa20.42■□□□□ 0.86
LSM6-207ENST00000515311 ABCB7O75027 752 aa20.42■□□□□ 0.86
LSM6-207ENST00000515311 TOP3BO95985 862 aaKnown RBP20.42■□□□□ 0.86
LSM6-207ENST00000515311 MAP4P27816 1152 aaKnown RBP20.42■□□□□ 0.86
LSM6-207ENST00000515311 OR4D1Q15615 310 aa20.42■□□□□ 0.86
LSM6-207ENST00000515311 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.42■□□□□ 0.86
LSM6-207ENST00000515311 ZNF438Q7Z4V0 828 aa20.42■□□□□ 0.86
LSM6-207ENST00000515311 NAXDQ8IW45 347 aa20.42■□□□□ 0.86
LSM6-207ENST00000515311 BANPQ8N9N5 519 aa20.42■□□□□ 0.86
LSM6-207ENST00000515311 STAG3L4Q8TBR4 150 aa20.42■□□□□ 0.86
LSM6-207ENST00000515311 MCOLN3Q8TDD5 553 aa20.42■□□□□ 0.86
LSM6-207ENST00000515311 DLG3Q92796 817 aa20.42■□□□□ 0.86
LSM6-207ENST00000515311 RAD51AP1Q96B01 352 aa20.42■□□□□ 0.86
LSM6-207ENST00000515311 HGH1Q9BTY7 390 aa20.42■□□□□ 0.86
LSM6-207ENST00000515311 TRIM54Q9BYV2 358 aa20.42■□□□□ 0.86
LSM6-207ENST00000515311 UNKQ9C0B0 810 aaKnown RBP20.42■□□□□ 0.86
LSM6-207ENST00000515311 ALG9Q9H6U8 611 aa20.42■□□□□ 0.86
LSM6-207ENST00000515311 RDH14Q9HBH5 336 aa20.42■□□□□ 0.86
LSM6-207ENST00000515311 EVA1BQ9NVM1 165 aa20.42■□□□□ 0.86
LSM6-207ENST00000515311 OARD1Q9Y530 152 aa20.42■□□□□ 0.86
LSM6-207ENST00000515311 GOLGA4Q13439 2230 aaKnown RBP20.42■□□□□ 0.86
LSM6-207ENST00000515311 LY6G6EA0A0G2JKS1 128 aa20.41■□□□□ 0.86
LSM6-207ENST00000515311 KERAO60938 352 aa20.41■□□□□ 0.86
LSM6-207ENST00000515311 RBP1P09455 135 aa20.41■□□□□ 0.86
LSM6-207ENST00000515311 GLB1P16278 677 aa20.41■□□□□ 0.86
LSM6-207ENST00000515311 BDKRB1P46663 353 aa20.41■□□□□ 0.86
LSM6-207ENST00000515311 GLRBP48167 497 aa20.41■□□□□ 0.86
LSM6-207ENST00000515311 AP1S2P56377 157 aa20.41■□□□□ 0.86
LSM6-207ENST00000515311 PHKG1Q16816 387 aa20.41■□□□□ 0.86
LSM6-207ENST00000515311 TECRLQ5HYJ1 363 aa20.41■□□□□ 0.86
LSM6-207ENST00000515311 RHBDD1Q8TEB9 315 aa20.41■□□□□ 0.86
LSM6-207ENST00000515311 SETD7Q8WTS6 366 aaKnown RBP20.41■□□□□ 0.86
LSM6-207ENST00000515311 ATP6V1G3Q96LB4 118 aa20.41■□□□□ 0.86
LSM6-207ENST00000515311 CAMK1GQ96NX5 476 aa20.41■□□□□ 0.86
LSM6-207ENST00000515311 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.41■□□□□ 0.86
LSM6-207ENST00000515311 ZNF358Q9NW07 568 aa20.41■□□□□ 0.86
LSM6-207ENST00000515311 GRID1Q9ULK0 1009 aa20.41■□□□□ 0.86
LSM6-207ENST00000515311 PADI4Q9UM07 663 aa20.41■□□□□ 0.86
LSM6-207ENST00000515311 PDE10AQ9Y233 779 aa20.41■□□□□ 0.86
LSM6-207ENST00000515311 U3KQA8 63 aa20.41■□□□□ 0.86
LSM6-207ENST00000515311 PABPN1LA6NDY0 278 aaKnown RBP20.4■□□□□ 0.86
LSM6-207ENST00000515311 PPM1DO15297 605 aa20.4■□□□□ 0.86
LSM6-207ENST00000515311 HIST1H2AGP0C0S8 130 aaPredicted RBP20.4■□□□□ 0.86
LSM6-207ENST00000515311 CKMT1AP12532 417 aa20.4■□□□□ 0.86
LSM6-207ENST00000515311 HIST1H2ADP20671 130 aa20.4■□□□□ 0.86
LSM6-207ENST00000515311 CDKL1Q00532 357 aa20.4■□□□□ 0.86
LSM6-207ENST00000515311 BIRC2Q13490 618 aa20.4■□□□□ 0.86
LSM6-207ENST00000515311 GPR18Q14330 331 aa20.4■□□□□ 0.86
LSM6-207ENST00000515311 GRB7Q14451 532 aa20.4■□□□□ 0.86
LSM6-207ENST00000515311 NR1D2Q14995 579 aa20.4■□□□□ 0.86
LSM6-207ENST00000515311 TMEM26Q6ZUK4 368 aa20.4■□□□□ 0.86
LSM6-207ENST00000515311 FRA10AC1Q70Z53 315 aa20.4■□□□□ 0.86
LSM6-207ENST00000515311 GPSM1Q86YR5 675 aa20.4■□□□□ 0.86
LSM6-207ENST00000515311 NAT6Q93015 286 aa20.4■□□□□ 0.86
LSM6-207ENST00000515311 ARL8AQ96BM9 186 aa20.4■□□□□ 0.86
LSM6-207ENST00000515311 HIST1H2AHQ96KK5 128 aa20.4■□□□□ 0.86
LSM6-207ENST00000515311 ATOH8Q96SQ7 321 aa20.4■□□□□ 0.86
LSM6-207ENST00000515311 HIST1H2AJQ99878 128 aa20.4■□□□□ 0.86
LSM6-207ENST00000515311 MRPL57Q9BQC6 102 aaKnown RBP20.4■□□□□ 0.86
LSM6-207ENST00000515311 H2AFJQ9BTM1 129 aa20.4■□□□□ 0.86
LSM6-207ENST00000515311 MRPL46Q9H2W6 279 aaKnown RBP20.4■□□□□ 0.86
LSM6-207ENST00000515311 RNF112Q9ULX5 631 aa20.4■□□□□ 0.86
LSM6-207ENST00000515311 TDRKHQ9Y2W6 561 aaKnown RBP20.4■□□□□ 0.86
LSM6-207ENST00000515311 RNF215Q9Y6U7 377 aa20.4■□□□□ 0.86
LSM6-207ENST00000515311 ANKRD12Q6UB98 2062 aa20.39■□□□□ 0.86
LSM6-207ENST00000515311 PRAMEF33A0A0G2JMD5 474 aa20.39■□□□□ 0.85
LSM6-207ENST00000515311 LILRA5A6NI73 299 aa20.39■□□□□ 0.85
LSM6-207ENST00000515311 RHPN2P1A8MT19 583 aa20.39■□□□□ 0.85
LSM6-207ENST00000515311 SYCE1LA8MT33 242 aa20.39■□□□□ 0.85
LSM6-207ENST00000515311 TYROBPO43914 113 aa20.39■□□□□ 0.85
LSM6-207ENST00000515311 SH3BP5O60239 455 aa20.39■□□□□ 0.85
LSM6-207ENST00000515311 PNLIPP16233 465 aa20.39■□□□□ 0.85
LSM6-207ENST00000515311 GPR3P46089 330 aa20.39■□□□□ 0.85
LSM6-207ENST00000515311 DUSP3P51452 185 aaPredicted RBP20.39■□□□□ 0.85
LSM6-207ENST00000515311 PRKG2Q13237 762 aa20.39■□□□□ 0.85
LSM6-207ENST00000515311 CCSMST1Q4G0I0 132 aa20.39■□□□□ 0.85
LSM6-207ENST00000515311 CDKL4Q5MAI5 379 aa20.39■□□□□ 0.85
LSM6-207ENST00000515311 CDHR3Q6ZTQ4 885 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms