RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 RHOXF2BP0C7M4 288 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 FGF3P11487 239 aaPredicted RBP13.54□□□□□ -0.24
USP46-209ENST00000514536 ATP5DP30049 168 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 CDKN2DP55273 166 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 TIAL1Q01085 375 aaKnown RBP eCLIP13.54□□□□□ -0.24
USP46-209ENST00000514536 PRKAA1Q13131 559 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 TTLL9Q3SXZ7 439 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 UGT3A1Q6NUS8 523 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 TTC23LQ6PF05 361 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 GPATCH11Q8N954 259 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 CD200R1Q8TD46 325 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 FOPNLQ96NB1 174 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 MAP3K3Q99759 626 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 RHOXF2Q9BQY4 288 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 L2HGDHQ9H9P8 463 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 ASCL3Q9NQ33 180 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 RALYQ9UKM9 306 aaKnown RBP13.54□□□□□ -0.24
USP46-209ENST00000514536 VWA7Q9Y334 891 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 IGF2RP11717 2491 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 TCRBV9S1A1TA0A576 114 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 GSAPA4D1B5 854 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 CXorf49A8MYA2 514 aaPredicted RBP13.54□□□□□ -0.24
USP46-209ENST00000514536 KDM1AO60341 852 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 C1orf105O95561 183 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 RPN2P04844 631 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 MCM3P25205 808 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 SHMT2P34897 504 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 BDKRB1P46663 353 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 KPNA2P52292 529 aaKnown RBP13.54□□□□□ -0.24
USP46-209ENST00000514536 KYNUQ16719 465 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 HECTD2Q5U5R9 776 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 CYS1Q717R9 158 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 SLC26A11Q86WA9 606 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 FAM129CQ86XR2 697 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 DCUN1D3Q8IWE4 304 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 CPNE9Q8IYJ1 553 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 ADGRF3Q8IZF5 1079 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 CDKL2Q92772 493 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 USP7Q93009 1102 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 FAM129AQ9BZQ8 928 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 TAS2R13Q9NYV9 303 aa13.54□□□□□ -0.24
USP46-209ENST00000514536 TRMT6Q9UJA5 497 aaKnown RBP13.54□□□□□ -0.24
USP46-209ENST00000514536 WDFY3Q8IZQ1 3526 aa13.53□□□□□ -0.24
USP46-209ENST00000514536 IGHV5-51A0A0C4DH38 117 aa13.53□□□□□ -0.24
USP46-209ENST00000514536 ESPNB1AK53 854 aa13.53□□□□□ -0.24
USP46-209ENST00000514536 TOX3O15405 576 aaPredicted RBP13.53□□□□□ -0.24
USP46-209ENST00000514536 MATN4O95460 622 aa13.53□□□□□ -0.24
USP46-209ENST00000514536 ITGA2BP08514 1039 aa13.53□□□□□ -0.24
USP46-209ENST00000514536 ANKRD34CP0C6C1 535 aa13.53□□□□□ -0.24
USP46-209ENST00000514536 PRDX3P30048 256 aaKnown RBP13.53□□□□□ -0.24
USP46-209ENST00000514536 SKIV2L2P42285 1042 aaKnown RBP13.53□□□□□ -0.24
USP46-209ENST00000514536 PGGT1BP53609 377 aa13.53□□□□□ -0.24
USP46-209ENST00000514536 GRB7Q14451 532 aa13.53□□□□□ -0.24
USP46-209ENST00000514536 KIF26BQ2KJY2 2108 aa13.53□□□□□ -0.24
USP46-209ENST00000514536 TBC1D25Q3MII6 688 aa13.53□□□□□ -0.24
USP46-209ENST00000514536 CCSMST1Q4G0I0 132 aa13.53□□□□□ -0.24
USP46-209ENST00000514536 FBXO38Q6PIJ6 1188 aa13.53□□□□□ -0.24
USP46-209ENST00000514536 PAQR3Q6TCH7 311 aa13.53□□□□□ -0.24
USP46-209ENST00000514536 IGF2-ASQ6U949 168 aa13.53□□□□□ -0.24
USP46-209ENST00000514536 CYHR1Q6ZMK1 362 aa13.53□□□□□ -0.24
USP46-209ENST00000514536 PRSS42Q7Z5A4 293 aa13.53□□□□□ -0.24
USP46-209ENST00000514536 ZC3HC1Q86WB0 502 aaKnown RBP13.53□□□□□ -0.24
USP46-209ENST00000514536 FBF1Q8TES7 1133 aa13.53□□□□□ -0.24
USP46-209ENST00000514536 PPM1MQ96MI6 270 aa13.53□□□□□ -0.24
USP46-209ENST00000514536 ZNF578Q96N58 590 aaPredicted RBP13.53□□□□□ -0.24
USP46-209ENST00000514536 IL17FQ96PD4 163 aa13.53□□□□□ -0.24
USP46-209ENST00000514536 ZNF768Q9H5H4 540 aaKnown RBP13.53□□□□□ -0.24
USP46-209ENST00000514536 THSD1Q9NS62 852 aa13.53□□□□□ -0.24
USP46-209ENST00000514536 NSMCE4AQ9NXX6 385 aa13.53□□□□□ -0.24
USP46-209ENST00000514536 SLC39A1Q9NY26 324 aa13.53□□□□□ -0.24
USP46-209ENST00000514536 ACTR10Q9NZ32 417 aa13.53□□□□□ -0.24
USP46-209ENST00000514536 CORO1CQ9ULV4 474 aaPredicted RBP13.53□□□□□ -0.24
USP46-209ENST00000514536 KRT87PA6NCN2 255 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 FAM159BA6NKW6 160 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 CDRT15L2A8MXV6 281 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 C2orf74A8MZ97 194 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 TLX3O43711 291 aaPredicted RBP13.52□□□□□ -0.25
USP46-209ENST00000514536 CHRM5P08912 532 aaPredicted RBP13.52□□□□□ -0.25
USP46-209ENST00000514536 MPC1LP0DKB6 136 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 CBSLP0DN79 551 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 SAT1P21673 171 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 ECHS1P30084 290 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 PKLRP30613 574 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 SLC5A2P31639 672 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 CBSP35520 551 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 CCNFP41002 786 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 MLLT3P42568 568 aaPredicted RBP13.52□□□□□ -0.25
USP46-209ENST00000514536 ERVPABLB-1P60509 514 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 FAM45BPQ6NSW5 357 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 CEP128Q6ZU80 1094 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 NEK10Q6ZWH5 1172 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 PROSER1Q86XN7 944 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 CTAGE3PQ8IX95 158 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 IFT20Q8IY31 132 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 C2orf73Q8N5S3 287 aaPredicted RBP13.52□□□□□ -0.25
USP46-209ENST00000514536 BMPERQ8N8U9 685 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 LMNTD1Q8N9Z9 388 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 FAM45AQ8TCE6 357 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 EEF1AKMT1Q8WVE0 214 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 KLHL6Q8WZ60 621 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms