RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 C17orf82Q86X59 251 aaPredicted RBP3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 RBFAQ8N0V3 343 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 CFAP52Q8N1V2 620 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 ESX1Q8N693 406 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 OR4D9Q8NGE8 314 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 OR2A12Q8NGT7 310 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 GOLGA5Q8TBA6 731 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 CASKIN2Q8WXE0 1202 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 THAP4Q8WY91 577 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 TFAP2BQ92481 460 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 STARD8Q92502 1023 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 ALG14Q96F25 216 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 SLC39A13Q96H72 371 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 BTN2A3PQ96KV6 586 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 MARK4Q96L34 752 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 LURAP1Q96LR2 239 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 ZSCAN31Q96LW9 406 aaPredicted RBP3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 SERPINB11Q96P15 392 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 TWNKQ96RR1 684 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 ULBP1Q9BZM6 244 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 IMPG2Q9BZV3 1241 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 UNKQ9C0B0 810 aaKnown RBP3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 TCEAL2Q9H3H9 227 aaPredicted RBP3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 SLAMF7Q9NQ25 335 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 AGPAT3Q9NRZ7 376 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 LANCL2Q9NS86 450 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 TUBA8Q9NY65 449 aaPredicted RBP3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 GOLGA6AQ9NYA3 693 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 MOCS1Q9NZB8 636 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 ZIM2Q9NZV7 527 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 IP6K2Q9UHH9 426 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 SLC12A6Q9UHW9 1150 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 KCND3Q9UK17 655 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 LIMCH1Q9UPQ0 1083 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 FADS3Q9Y5Q0 445 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 CFAP20Q9Y6A4 193 aaKnown RBP3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 DGKBQ9Y6T7 804 aa3.65□□□□□ -1.83
PDLIM5-218ENST00000513341 CSMD2Q7Z408 3487 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 ARHGAP10A1A4S6 786 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 IGLON5A6NGN9 336 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 LRRIQ3A6PVS8 624 aaPredicted RBP3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 KCNU1A8MYU2 1149 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 PPP6CO00743 305 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 MAPK13O15264 365 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 SLC16A6O15403 523 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 EXOC3O60645 756 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 KLHL41O60662 606 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 PPP6R2O75170 966 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 CLDN11O75508 207 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 TM7SF2O76062 418 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 APOEP02649 317 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 CTSLP07711 333 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 HOXC4P09017 264 aaPredicted RBP3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 PRKAR1AP10644 381 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 PF4V1P10720 104 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 SLC2A3P11169 496 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 SRCP12931 536 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 ADRB3P13945 408 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 CD1EP15812 388 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 CD1CP29017 333 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 STAT1P42224 750 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 SUOXP51687 545 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 PGDP52209 483 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 ZNF134P52741 427 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 DAOAP59103 153 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 PPP3CAQ08209 521 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 ART3Q13508 389 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 ZRSR2Q15696 482 aaKnown RBP3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 C5orf22Q49AR2 442 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 RABGAP1LQ5R372 815 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 TPRG1LQ5T0D9 272 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 AFMIDQ63HM1 303 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 NADSYN1Q6IA69 706 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 JMJD6Q6NYC1 403 aaPredicted RBP3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 TMEM71Q6P5X7 295 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 SEM1Q6ZVN7 128 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 MEPCEQ7L2J0 689 aaKnown RBP3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 CENPQQ7L2Z9 268 aaPredicted RBP3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 EPM2AIP1Q7L775 607 aaPredicted RBP3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 YTHDF3Q7Z739 585 aaKnown RBP3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 TTC7BQ86TV6 843 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 RHOT1Q8IXI2 618 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 CCAR2Q8N163 923 aaKnown RBP3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 SIX6OS1Q8N1H7 587 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 PPM1NQ8N819 430 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 BMPERQ8N8U9 685 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 Q8N9G6 341 aaPredicted RBP3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 CCDC150Q8NCX0 1101 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 FAM46DQ8NEK8 389 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 NRG4Q8WWG1 115 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 ART4Q93070 314 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 PNPLA2Q96AD5 504 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 RTP4Q96DX8 246 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 HSFY1Q96LI6 401 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 PRICKLE1Q96MT3 831 aaPredicted RBP3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 AGAP3Q96P47 875 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 SLC2A13Q96QE2 648 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 BARD1Q99728 777 aaKnown RBP3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 SLC25A23Q9BV35 468 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 TRIM62Q9BVG3 475 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms