RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 SKA2Q8WVK7 121 aaPredicted RBP9.11□□□□□ -0.95
DHFR-206ENST00000513048 SNX19Q92543 992 aa9.11□□□□□ -0.95
DHFR-206ENST00000513048 NELL1Q92832 810 aa9.11□□□□□ -0.95
DHFR-206ENST00000513048 SPACA7Q96KW9 195 aa9.11□□□□□ -0.95
DHFR-206ENST00000513048 HSPA12BQ96MM6 686 aa9.11□□□□□ -0.95
DHFR-206ENST00000513048 INSM2Q96T92 566 aaPredicted RBP9.11□□□□□ -0.95
DHFR-206ENST00000513048 CD244Q9BZW8 370 aa9.11□□□□□ -0.95
DHFR-206ENST00000513048 ILKAPQ9H0C8 392 aaPredicted RBP9.11□□□□□ -0.95
DHFR-206ENST00000513048 TCEAL2Q9H3H9 227 aaPredicted RBP9.11□□□□□ -0.95
DHFR-206ENST00000513048 NPHS2Q9NP85 383 aa9.11□□□□□ -0.95
DHFR-206ENST00000513048 TRNAU1APQ9NX07 287 aaKnown RBP9.11□□□□□ -0.95
DHFR-206ENST00000513048 ARL15Q9NXU5 204 aa9.11□□□□□ -0.95
DHFR-206ENST00000513048 KLF15Q9UIH9 416 aa9.11□□□□□ -0.95
DHFR-206ENST00000513048 ZDHHC2Q9UIJ5 367 aa9.11□□□□□ -0.95
DHFR-206ENST00000513048 ZNF225Q9UK10 706 aa9.11□□□□□ -0.95
DHFR-206ENST00000513048 PCOLCE2Q9UKZ9 415 aa9.11□□□□□ -0.95
DHFR-206ENST00000513048 KCNK6Q9Y257 313 aa9.11□□□□□ -0.95
DHFR-206ENST00000513048 GPSM3Q9Y4H4 160 aa9.11□□□□□ -0.95
DHFR-206ENST00000513048 TNPO3Q9Y5L0 923 aaKnown RBP9.11□□□□□ -0.95
DHFR-206ENST00000513048 BDP1A6H8Y1 2624 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 TMEM233B4DJY2 109 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 MATN2O00339 956 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 OR7A17O14581 309 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 GPR37L1O60883 481 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 EML2O95834 649 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 FGF4P08620 206 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 TROVE2P10155 538 aaKnown RBP eCLIP9.1□□□□□ -0.954e-14■■□□□ 12
DHFR-206ENST00000513048 IMPA1P29218 277 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 GDF5P43026 501 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 HNMTP50135 292 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 RPL14P50914 215 aaKnown RBP9.1□□□□□ -0.95
DHFR-206ENST00000513048 RACK1P63244 317 aaKnown RBP9.1□□□□□ -0.95
DHFR-206ENST00000513048 CTBSQ01459 385 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 LCP2Q13094 533 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 TRAF3Q13114 568 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 TUBB3Q13509 450 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 LRP8Q14114 963 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 PTK2BQ14289 1009 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 CLCA4Q14CN2 919 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 UAP1L1Q3KQV9 507 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 UGT3A2Q3SY77 523 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 GKAP1Q5VSY0 366 aaPredicted RBP9.1□□□□□ -0.95
DHFR-206ENST00000513048 FOXR1Q6PIV2 292 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 ABRAXAS1Q6UWZ7 409 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 WASH2PQ6VEQ5 465 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 GOLGA7Q7Z5G4 137 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 SYVN1Q86TM6 617 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 IQCHQ86VS3 1027 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 LONP2Q86WA8 852 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 DCP2Q8IU60 420 aaKnown RBP9.1□□□□□ -0.95
DHFR-206ENST00000513048 C1orf210Q8IVY1 113 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 WDR75Q8IWA0 830 aaKnown RBP9.1□□□□□ -0.95
DHFR-206ENST00000513048 LRRC56Q8IYG6 542 aaPredicted RBP9.1□□□□□ -0.95
DHFR-206ENST00000513048 TMEFF1Q8IYR6 380 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 TCAIMQ8N3R3 496 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 ANKS4BQ8N8V4 417 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 DTWD2Q8NBA8 298 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 PHC3Q8NDX5 983 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 OR5AR1Q8NGP9 310 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 OR56A3Q8NH54 315 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 CCL4L1Q8NHW4 92 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 MAPK15Q8TD08 544 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 GPBAR1Q8TDU6 330 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 TRPC4APQ8TEL6 797 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 PPP4R1Q8TF05 950 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 TFGQ92734 400 aaPredicted RBP9.1□□□□□ -0.95
DHFR-206ENST00000513048 KLHDC7BQ96G42 594 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 CCDC138Q96M89 665 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 FOPNLQ96NB1 174 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 EGFL8Q99944 293 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 MENTQ9BUN1 341 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 TRIM54Q9BYV2 358 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 TRIM55Q9BYV6 548 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 SHCBP1LQ9BZQ2 653 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 TMEM168Q9H0V1 697 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 TM9SF3Q9HD45 589 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 WASH6PQ9NQA3 447 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 PRDM8Q9NQV8 689 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 WWOXQ9NZC7 414 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 SCHIP1Q9P0W5 487 aaPredicted RBP9.1□□□□□ -0.95
DHFR-206ENST00000513048 STOX2Q9P2F5 926 aaPredicted RBP9.1□□□□□ -0.95
DHFR-206ENST00000513048 MARCOQ9UEW3 520 aaPredicted RBP9.1□□□□□ -0.95
DHFR-206ENST00000513048 TBC1D29Q9UFV1 150 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 MOSPD1Q9UJG1 213 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 PSMD13Q9UNM6 376 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 USH1CQ9Y6N9 552 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 GON4LQ3T8J9 2241 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 FANCMQ8IYD8 2048 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 THADAQ6YHU6 1953 aa9.1□□□□□ -0.95
DHFR-206ENST00000513048 ZDBF2Q9HCK1 2354 aa9.09□□□□□ -0.95
DHFR-206ENST00000513048 MEI4A8MW99 385 aa9.09□□□□□ -0.95
DHFR-206ENST00000513048 K7EPI3 171 aa9.09□□□□□ -0.95
DHFR-206ENST00000513048 LAMTOR5O43504 91 aa9.09□□□□□ -0.95
DHFR-206ENST00000513048 PRAMEF4O60810 478 aa9.09□□□□□ -0.95
DHFR-206ENST00000513048 STK16O75716 305 aa9.09□□□□□ -0.95
DHFR-206ENST00000513048 RASGRP1O95267 797 aa9.09□□□□□ -0.95
DHFR-206ENST00000513048 SLC16A8O95907 504 aa9.09□□□□□ -0.95
DHFR-206ENST00000513048 JUNP05412 331 aaKnown RBP9.09□□□□□ -0.95
DHFR-206ENST00000513048 HIST1H2AGP0C0S8 130 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms