RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 ZNF408Q9H9D4 720 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 SARS2Q9NP81 518 aaKnown RBP11.33□□□□□ -0.6
SNX25-205ENST00000512853 EXD2Q9NVH0 621 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 ELOVL2Q9NXB9 296 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 ERVK-18Q9QC07 812 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 TRPS1Q9UHF7 1281 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 FBXO10Q9UK96 956 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 INVSQ9Y283 1065 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 TPRKBQ9Y3C4 175 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 OARD1Q9Y530 152 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 TRIM17Q9Y577 477 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 PCDHGA10Q9Y5H3 936 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 RAI2Q9Y5P3 530 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 ZNF106Q9H2Y7 1883 aaKnown RBP11.33□□□□□ -0.6
SNX25-205ENST00000512853 A0A096LPI6 279 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 GOLGA8CPA6NN73 597 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 PTGES3LE9PB15 166 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 PRMT5O14744 637 aaPredicted RBP11.33□□□□□ -0.6
SNX25-205ENST00000512853 TAPBPO15533 448 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 XPNPEP2O43895 674 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 ERN1O75460 977 aaKnown RBP11.33□□□□□ -0.6
SNX25-205ENST00000512853 SERPINA1P01009 418 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 PRKACGP22612 351 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 IGFBP5P24593 272 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 SLC6A4P31645 630 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 MASP1P48740 699 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 HNRNPFP52597 415 aaKnown RBP11.33□□□□□ -0.6
SNX25-205ENST00000512853 CDH4P55283 916 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 HUNKP57058 714 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 IL5RAQ01344 420 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 MVKQ03426 396 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 CACNG1Q06432 222 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 TAF10Q12962 218 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 PERM1Q5SV97 790 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 DNAJC14Q6Y2X3 702 aaPredicted RBP11.33□□□□□ -0.6
SNX25-205ENST00000512853 P2RY8Q86VZ1 359 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 HOMEZQ8IX15 550 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 CADM3Q8N126 398 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 LIX1Q8N485 282 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 NAT16Q8N8M0 369 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 PYURFQ96I23 114 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 TBCDQ9BTW9 1192 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 CCDC90BQ9GZT6 254 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 KCNH6Q9H252 994 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 TNKS2Q9H2K2 1166 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 LRTM1Q9HBL6 345 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 ANKHQ9HCJ1 492 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 KIAA1522Q9P206 1035 aaPredicted RBP11.33□□□□□ -0.6
SNX25-205ENST00000512853 CPA4Q9UI42 421 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 AGO1Q9UL18 857 aaKnown RBP11.33□□□□□ -0.6
SNX25-205ENST00000512853 TMED5Q9Y3A6 229 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 FAM32AQ9Y421 112 aaKnown RBP11.33□□□□□ -0.6
SNX25-205ENST00000512853 PMF1-BGLAPU3KQ54 211 aa11.33□□□□□ -0.6
SNX25-205ENST00000512853 HTR3EA5X5Y0 456 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 TTC34A8MYJ7 566 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 M0R3G1 203 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 WNT9AO14904 365 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 ACSL4O60488 711 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 DUSP11O75319 330 aaKnown RBP11.32□□□□□ -0.6
SNX25-205ENST00000512853 NADKO95544 446 aaPredicted RBP11.32□□□□□ -0.6
SNX25-205ENST00000512853 NTRK1P04629 796 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 ZDHHC11BP0C7U3 371 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 AKR1A1P14550 325 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 RPS3P23396 243 aaKnown RBP eCLIP11.32□□□□□ -0.6
SNX25-205ENST00000512853 GNPDA1P46926 289 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 HSPA7P48741 367 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 TMED10P49755 219 aaKnown RBP11.32□□□□□ -0.6
SNX25-205ENST00000512853 CD300CQ08708 224 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 VAC14Q08AM6 782 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 INAQ16352 499 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 BCL2A1Q16548 175 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 HIST2H2ACQ16777 129 aaPredicted RBP11.32□□□□□ -0.6
SNX25-205ENST00000512853 CPZQ66K79 652 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 LAIR1Q6GTX8 287 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 METTL2BQ6P1Q9 378 aaKnown RBP11.32□□□□□ -0.6
SNX25-205ENST00000512853 SUSD1Q6UWL2 747 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 PLEKHG7Q6ZR37 379 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 CFAP52Q8N1V2 620 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 SVOPQ8N4V2 548 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 EFHBQ8N7U6 833 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 GPR152Q8TDT2 470 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 FAM120BQ96EK7 910 aaKnown RBP11.32□□□□□ -0.6
SNX25-205ENST00000512853 EXOC2Q96KP1 924 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 ADGRE3Q9BY15 652 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 SLC29A3Q9BZD2 475 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 SERHLQ9NQF3 203 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 PCDHB14Q9Y5E9 798 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 SCN8AQ9UQD0 1980 aa11.32□□□□□ -0.6
SNX25-205ENST00000512853 IQCF5A8MTL0 148 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 ANKRD66B4E2M5 251 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 MANBAO00462 879 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 TOR1BO14657 336 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 AREL1O15033 823 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 MITFO75030 526 aaPredicted RBP11.31□□□□□ -0.6
SNX25-205ENST00000512853 ARHGEF15O94989 841 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 MT-ND2P03891 347 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 FUT4P22083 530 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 THPOP40225 353 aa11.31□□□□□ -0.6
SNX25-205ENST00000512853 CLK3P49761 638 aaKnown RBP11.31□□□□□ -0.6
SNX25-205ENST00000512853 KCNQ1P51787 676 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms