RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 RBMXL3Q8N7X1 1067 aaKnown RBP12.16□□□□□ -0.46
VEGFA-216ENST00000512683 Q8NA96 180 aa12.16□□□□□ -0.46
VEGFA-216ENST00000512683 CLEC1AQ8NC01 280 aa12.16□□□□□ -0.46
VEGFA-216ENST00000512683 STYXQ8WUJ0 223 aa12.16□□□□□ -0.46
VEGFA-216ENST00000512683 PPM1MQ96MI6 270 aa12.16□□□□□ -0.46
VEGFA-216ENST00000512683 NLE1Q9NVX2 485 aaPredicted RBP12.16□□□□□ -0.46
VEGFA-216ENST00000512683 ACTR10Q9NZ32 417 aa12.16□□□□□ -0.46
VEGFA-216ENST00000512683 IMPACTQ9P2X3 320 aa12.16□□□□□ -0.46
VEGFA-216ENST00000512683 GPN3Q9UHW5 284 aaPredicted RBP12.16□□□□□ -0.46
VEGFA-216ENST00000512683 B3GNT3Q9Y2A9 372 aa12.16□□□□□ -0.46
VEGFA-216ENST00000512683 TCRBV7S2A1N4TA0A589 114 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 MIF4GDA9UHW6 222 aaKnown RBP12.15□□□□□ -0.46
VEGFA-216ENST00000512683 OR2B3O76000 313 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 ONECUT2O95948 504 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 FTCDO95954 541 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 PIM1P11309 404 aaPredicted RBP12.15□□□□□ -0.46
VEGFA-216ENST00000512683 MC4RP32245 332 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 ARCN1P48444 511 aaKnown RBP12.15□□□□□ -0.46
VEGFA-216ENST00000512683 KIF5AQ12840 1032 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 SPARCL1Q14515 664 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 MYBPC3Q14896 1274 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 KIR2DS3Q14952 304 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 DCAF10Q5QP82 559 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 LYPLAL1Q5VWZ2 237 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 KCTD11Q693B1 232 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 CDHR3Q6ZTQ4 885 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 SERPINA9Q86WD7 417 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 LILRA3Q8N6C8 439 aaPredicted RBP12.15□□□□□ -0.46
VEGFA-216ENST00000512683 TTC13Q8NBP0 860 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 SPC24Q8NBT2 197 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 PHC3Q8NDX5 983 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 OR13C4Q8NGS5 318 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 OR2Y1Q8NGV0 311 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 CDKN2AIPNLQ96HQ2 116 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 HES6Q96HZ4 224 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 ALS2CR12Q96Q35 445 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 TTC1Q99614 292 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 BARD1Q99728 777 aaKnown RBP12.15□□□□□ -0.46
VEGFA-216ENST00000512683 TBL1YQ9BQ87 522 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 ATP13A2Q9NQ11 1180 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 ENAMQ9NRM1 1142 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 R3HDM2Q9Y2K5 976 aaKnown RBP12.15□□□□□ -0.46
VEGFA-216ENST00000512683 CAPN6Q9Y6Q1 641 aa12.15□□□□□ -0.46
VEGFA-216ENST00000512683 A6NL46 340 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 H3BMH7 237 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 SEMA7AO75326 666 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 CBX6O95503 412 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 METTL18O95568 372 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 AP2A1O95782 977 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 ALBP02768 609 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 FTH1P02794 183 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 ACADLP28330 430 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 PDHA2P29803 388 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 FOLR3P41439 243 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 LMAN1P49257 510 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 ARSFP54793 590 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 ATP1A4Q13733 1029 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 SLC5A12Q1EHB4 618 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 EIF2S3LQ2VIR3 472 aaKnown RBP12.14□□□□□ -0.47
VEGFA-216ENST00000512683 PTCHD3Q3KNS1 767 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 YOD1Q5VVQ6 348 aaPredicted RBP12.14□□□□□ -0.47
VEGFA-216ENST00000512683 MLIPQ5VWP3 458 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 PACS1Q6VY07 963 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 UNC5AQ6ZN44 842 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 TAS2R42Q7RTR8 314 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 MRGPREQ86SM8 312 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 SYCE1Q8N0S2 351 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 GALNT16Q8N428 558 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 ZADH2Q8N4Q0 377 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 UBL4BQ8N7F7 174 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 C19orf47Q8N9M1 422 aaKnown RBP12.14□□□□□ -0.47
VEGFA-216ENST00000512683 FAM71DQ8N9W8 422 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 SLC35B2Q8TB61 432 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 NAT14Q8WUY8 206 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 SLC22A18Q96BI1 424 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 VPS50Q96JG6 964 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 GBP5Q96PP8 586 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 LRRC40Q9H9A6 602 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 IL1RAPL1Q9NZN1 696 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 IFT80Q9P2H3 777 aaPredicted RBP12.14□□□□□ -0.47
VEGFA-216ENST00000512683 FAM8A1Q9UBU6 413 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 NDOR1Q9UHB4 597 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 PLCL2Q9UPR0 1127 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 MYO9AB2RTY4 2548 aa12.14□□□□□ -0.47
VEGFA-216ENST00000512683 DOPEY1Q5JWR5 2465 aa12.13□□□□□ -0.47
VEGFA-216ENST00000512683 GOLGA6L9A6NEM1 432 aa12.13□□□□□ -0.47
VEGFA-216ENST00000512683 FKBP9O95302 570 aa12.13□□□□□ -0.47
VEGFA-216ENST00000512683 PPARGP37231 505 aaPredicted RBP12.13□□□□□ -0.47
VEGFA-216ENST00000512683 GABRA4P48169 554 aa12.13□□□□□ -0.47
VEGFA-216ENST00000512683 GDF10P55107 478 aa12.13□□□□□ -0.47
VEGFA-216ENST00000512683 PRKG2Q13237 762 aa12.13□□□□□ -0.47
VEGFA-216ENST00000512683 P3H1Q32P28 736 aa12.13□□□□□ -0.47
VEGFA-216ENST00000512683 PLEKHN1Q494U1 663 aaPredicted RBP12.13□□□□□ -0.47
VEGFA-216ENST00000512683 NKAIN1Q4KMZ8 207 aa12.13□□□□□ -0.47
VEGFA-216ENST00000512683 ZRANB3Q5FWF4 1079 aa12.13□□□□□ -0.47
VEGFA-216ENST00000512683 CRB2Q5IJ48 1285 aa12.13□□□□□ -0.47
VEGFA-216ENST00000512683 MRPL14Q6P1L8 145 aaKnown RBP12.13□□□□□ -0.47
VEGFA-216ENST00000512683 MICALCLQ6ZW33 695 aa12.13□□□□□ -0.47
VEGFA-216ENST00000512683 MAMDC2Q7Z304 686 aaPredicted RBP12.13□□□□□ -0.47
VEGFA-216ENST00000512683 LINC00523Q86TU6 105 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms