RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	SLC9B2	Q86UD5	537 aa		14.14	□□□□□ -0.15
MATR3-238	ENST00000512107	LINC01555	Q8NAE3	123 aa		14.14	□□□□□ -0.15
MATR3-238	ENST00000512107	SKA2	Q8WVK7	121 aa	Predicted RBP	14.14	□□□□□ -0.15
MATR3-238	ENST00000512107	ANKRD7	Q92527	254 aa		14.14	□□□□□ -0.15
MATR3-238	ENST00000512107	RSC1A1	Q92681	617 aa		14.14	□□□□□ -0.15
MATR3-238	ENST00000512107	TSPAN17	Q96FV3	270 aa		14.14	□□□□□ -0.15
MATR3-238	ENST00000512107	PPM1M	Q96MI6	270 aa		14.14	□□□□□ -0.15
MATR3-238	ENST00000512107	CCDC3	Q9BQI4	270 aa		14.14	□□□□□ -0.15
MATR3-238	ENST00000512107	CCDC77	Q9BR77	488 aa		14.14	□□□□□ -0.15
MATR3-238	ENST00000512107	DERL2	Q9GZP9	239 aa		14.14	□□□□□ -0.15
MATR3-238	ENST00000512107	TWSG1	Q9GZX9	223 aa		14.14	□□□□□ -0.15
MATR3-238	ENST00000512107	KIR3DX1	Q9H7L2	352 aa		14.14	□□□□□ -0.15
MATR3-238	ENST00000512107	POT1	Q9NUX5	634 aa		14.14	□□□□□ -0.15
MATR3-238	ENST00000512107	PCMTD2	Q9NV79	361 aa		14.14	□□□□□ -0.15
MATR3-238	ENST00000512107	SPHK1	Q9NYA1	384 aa		14.14	□□□□□ -0.15
MATR3-238	ENST00000512107	EMCN	Q9ULC0	261 aa		14.14	□□□□□ -0.15
MATR3-238	ENST00000512107	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	14.14	□□□□□ -0.15
MATR3-238	ENST00000512107	TDRKH	Q9Y2W6	561 aa	Known RBP	14.14	□□□□□ -0.15
MATR3-238	ENST00000512107	IKBKG	Q9Y6K9	419 aa		14.14	□□□□□ -0.15
MATR3-238	ENST00000512107	CEP250	Q9BV73	2442 aa		14.14	□□□□□ -0.15
MATR3-238	ENST00000512107	SPEG	Q15772	3267 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	IGHV1OR21-1	A0A087WYE8	117 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	IFRD1	O00458	451 aa	Predicted RBP	14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	BTN3A1	O00481	513 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	TNFSF14	O43557	240 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	NUDT21	O43809	227 aa	Known RBP	14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	KRT38	O76015	456 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	DKK1	O94907	266 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	ENO3	P13929	434 aa	Predicted RBP	14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	HOXB3	P14651	431 aa	Predicted RBP	14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	GLB1	P16278	677 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	CNTF	P26441	200 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	CD1C	P29017	333 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	CCNF	P41002	786 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	SLC12A2	P55011	1212 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	DAB2	P98082	770 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	PLOD1	Q02809	727 aa	Predicted RBP	14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	IFFO1	Q0D2I5	559 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	TRIP6	Q15654	476 aa	Known RBP	14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	KRT71	Q3SY84	523 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	LRIG3	Q6UXM1	1119 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	ZNF574	Q6ZN55	896 aa	Predicted RBP	14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	UBE2R2	Q712K3	238 aa	Predicted RBP	14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	SPRED1	Q7Z699	444 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	TRABD2A	Q86V40	505 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	MARCH9	Q86YJ5	346 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	TRIM48	Q8IWZ4	208 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	FAM20C	Q8IXL6	584 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	LRRC56	Q8IYG6	542 aa	Predicted RBP	14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	TBC1D21	Q8IYX1	336 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	C4orf33	Q8N1A6	199 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	NKAP	Q8N5F7	415 aa	Known RBP	14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	PPFIBP2	Q8ND30	876 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	OR4E2	Q8NGC2	313 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	FLVCR1-AS1	Q8TAF5	88 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	ARL8A	Q96BM9	186 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	SLC12A9	Q9BXP2	914 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	ROPN1B	Q9BZX4	212 aa	Predicted RBP	14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	TRIT1	Q9H3H1	467 aa	Known RBP	14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	MVB12B	Q9H7P6	319 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	ROPN1	Q9HAT0	212 aa	Predicted RBP	14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	TMEM216	Q9P0N5	145 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	ACOT9	Q9Y305	439 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	ASB1	Q9Y576	335 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	BAHCC1	Q9P281	2608 aa		14.13	□□□□□ -0.15
MATR3-238	ENST00000512107	TPR	P12270	2363 aa	Known RBP	14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	SNRNP200	O75643	2136 aa	Known RBP	14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	IQANK1	A0A1B0GTG1	560 aa		14.12	□□□□□ -0.15
MATR3-238	ENST00000512107		A0A1W2PPV9	198 aa		14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	RHPN2P1	A8MT19	583 aa		14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	MYO1C	O00159	1063 aa		14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	EIF3F	O00303	357 aa	Predicted RBP	14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	MAP2K7	O14733	419 aa		14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	CDH16	O75309	829 aa		14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	KRT37	O76014	449 aa		14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	KLHL2	O95198	593 aa		14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	LTA4H	P09960	611 aa	Known RBP	14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	TFEB	P19484	476 aa		14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	CSRP1	P21291	193 aa	Known RBP	14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	ALDH4A1	P30038	563 aa		14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	PKLR	P30613	574 aa		14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	MAPK9	P45984	424 aa		14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	LSS	P48449	732 aa		14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	CCDC157	Q569K6	752 aa		14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	FBXO48	Q5FWF7	155 aa		14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	FAM219B	Q5XKK7	198 aa		14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	USP53	Q70EK8	1073 aa		14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	GLRX5	Q86SX6	157 aa		14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	ADGRF3	Q8IZF5	1079 aa		14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	MYO1H	Q8N1T3	1032 aa		14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	ATOH8	Q96SQ7	321 aa		14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	NUDT22	Q9BRQ3	303 aa		14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	ALG9	Q9H6U8	611 aa		14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	UCK1	Q9HA47	277 aa		14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	SYTL2	Q9HCH5	934 aa		14.12	□□□□□ -0.15
MATR3-238	ENST00000512107	UTP6	Q9NYH9	597 aa	Known RBP	14.12	□□□□□ -0.15
MATR3-238	ENST00000512107		A0A087X1B8	175 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	LRRC14B	A6NHZ5	514 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	LILRA5	A6NI73	299 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	NTN3	O00634	580 aa	Predicted RBP	14.11	□□□□□ -0.15

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms