RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 LINGO2Q7L985 606 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 IQCF1Q8N6M8 205 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 SCCPDHQ8NBX0 429 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 TMEM116Q8NCL8 245 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 BEST2Q8NFU1 509 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 HUS1BQ8NHY5 278 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 SPATA20Q8TB22 786 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 GTF3C6Q969F1 213 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 ERGIC1Q969X5 290 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 FAM149B1Q96BN6 582 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 SLITRK1Q96PX8 696 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 TREX2Q9BQ50 279 aaPredicted RBP3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 KXD1Q9BQD3 176 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 ITPAQ9BY32 194 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 ZBP1Q9H171 429 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 MUC13Q9H3R2 512 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 CWH43Q9H720 699 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 PLEKHA5Q9HAU0 1116 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 KRT84Q9NSB2 600 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 SLC6A13Q9NSD5 602 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 MAP3K20Q9NYL2 800 aaKnown RBP3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 CYP39A1Q9NYL5 469 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 CISD1Q9NZ45 108 aaKnown RBP3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 OR6C3Q9NZP0 311 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 LIMA1Q9UHB6 759 aaKnown RBP3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 AGO1Q9UL18 857 aaKnown RBP3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 MKLN1Q9UL63 735 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 CDH7Q9ULB5 785 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 MYO6Q9UM54 1294 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 KCNE2Q9Y6J6 123 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 LAMA4Q16363 1823 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 CACNA1EQ15878 2313 aa3.55□□□□□ -1.84
TOPBP1-208ENST00000511439 ITPR2Q14571 2701 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 ADGRG4Q8IZF6 3080 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 A0A1W2PQF6 199 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 DYTNA2CJ06 578 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 EIF3CLB5ME19 914 aaKnown RBP3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 PTP4A3O75365 173 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 EIF2S1P05198 315 aaKnown RBP3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 ACADMP11310 421 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 CD58P19256 250 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 NFKBIAP25963 317 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 HOXC8P31273 242 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 ARL3P36405 182 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 PIGAP37287 484 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 DCTP40126 519 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 PBX3P40426 434 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 MLH1P40692 756 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 PCYT1AP49585 367 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 SEMG2Q02383 582 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 ARHGAP1Q07960 439 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 CRYZQ08257 329 aaKnown RBP3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 CCDC173Q0VFZ6 552 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 C2orf68Q2NKX9 166 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 DPCR1Q3MIW9 517 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 SLC45A4Q5BKX6 768 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 PLEKHA7Q6IQ23 1121 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 NAA16Q6N069 864 aaPredicted RBP3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 KLHL24Q6TFL4 600 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 Q6ZS52 159 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 CHST3Q7LGC8 479 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 SHFQ7M4L6 423 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 GSTA5Q7RTV2 222 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 GLRX5Q86SX6 157 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 LRRC43Q8N309 656 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 ZBTB2Q8N680 514 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 PPTC7Q8NI37 304 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 CREB3L4Q8TEY5 395 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 UBE2Q2Q8WVN8 375 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 ARHGEF2Q92974 986 aaKnown RBP3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 SMARCE1Q969G3 411 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 MIB2Q96AX9 1013 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 MSANTD3Q96H12 275 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 SLC41A2Q96JW4 573 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 LRFN5Q96NI6 719 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 ZNF570Q96NI8 536 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 FAM110AQ9BQ89 295 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 FZD8Q9H461 694 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 MKKSQ9NPJ1 570 aaPredicted RBP3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 EHD2Q9NZN4 543 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 ABI3Q9P2A4 366 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 AAR2Q9Y312 384 aaKnown RBP3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 STON1Q9Y6Q2 735 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 MTORP42345 2549 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 LRBAP50851 2863 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 NAV1Q8NEY1 1877 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 SPAG17Q6Q759 2223 aa3.54□□□□□ -1.84
TOPBP1-208ENST00000511439 FLNCQ14315 2725 aa3.53□□□□□ -1.84
TOPBP1-208ENST00000511439 FAM237AA0A1B0GTK4 181 aa3.53□□□□□ -1.84
TOPBP1-208ENST00000511439 FAM237BA0A1B0GVD1 139 aa3.53□□□□□ -1.84
TOPBP1-208ENST00000511439 TMEM202A6NGA9 273 aa3.53□□□□□ -1.84
TOPBP1-208ENST00000511439 LIPT2A6NK58 231 aa3.53□□□□□ -1.84
TOPBP1-208ENST00000511439 B4DLN1 442 aa3.53□□□□□ -1.84
TOPBP1-208ENST00000511439 PLK4O00444 970 aa3.53□□□□□ -1.84
TOPBP1-208ENST00000511439 HSPA12AO43301 675 aa3.53□□□□□ -1.84
TOPBP1-208ENST00000511439 DOK2O60496 412 aa3.53□□□□□ -1.84
TOPBP1-208ENST00000511439 ATP9AO75110 1047 aa3.53□□□□□ -1.84
TOPBP1-208ENST00000511439 ECI2O75521 394 aa3.53□□□□□ -1.84
TOPBP1-208ENST00000511439 GLUD1P00367 558 aa3.53□□□□□ -1.84
TOPBP1-208ENST00000511439 CHRNA1P02708 482 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms