RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-216ENST00000509784 PDE1BQ01064 536 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 BNC1Q01954 994 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 CRYZQ08257 329 aaKnown RBP3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 TRAF3Q13114 568 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 UBE2V1Q13404 147 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 SNTB1Q13884 538 aaKnown RBP3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 TUBB2AQ13885 445 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 IL11RAQ14626 422 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 WHAMMP3Q1A5X7 153 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 LETM2Q2VYF4 491 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 ZNF260Q3ZCT1 412 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 MCMDC2Q4G0Z9 681 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 EFHC1Q5JVL4 640 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 BEND6Q5SZJ8 279 aaPredicted RBP3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 ZDHHC20Q5W0Z9 365 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 RESP18Q5W5W9 173 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 DHRS7BQ6IAN0 325 aaPredicted RBP3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 TMEM211Q6ICI0 200 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 LCN10Q6JVE6 187 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 C8orf82Q6P1X6 216 aaPredicted RBP3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 BRAT1Q6PJG6 821 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 TPRG1Q6ZUI0 275 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 INTS8Q75QN2 995 aaKnown RBP3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 HAUS6Q7Z4H7 955 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 LDB1Q86U70 411 aaPredicted RBP3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 GUF1Q8N442 669 aaKnown RBP3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 FBXO39Q8N4B4 442 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 CEP112Q8N8E3 955 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 TC2NQ8N9U0 490 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 KBTBD3Q8NAB2 608 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 TDRD5Q8NAT2 981 aaKnown RBP3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 OR6J1Q8NGC5 347 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 VPS33AQ96AX1 596 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 ZNF274Q96GC6 653 aaPredicted RBP3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 CAMK1GQ96NX5 476 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 FCRL4Q96PJ5 515 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 OR1F2PQ96R84 312 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 MYCBPQ99417 103 aaPredicted RBP3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 TUBB2BQ9BVA1 445 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 C1QTNF7Q9BXJ2 289 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 PARD6BQ9BYG5 372 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 LRRC2Q9BYS8 371 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 ANKRD2Q9GZV1 360 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 SPATC1LQ9H0A9 340 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 PPIL3Q9H2H8 161 aaKnown RBP3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 MMP27Q9H306 513 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 BOLA2Q9H3K6 86 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 BICC1Q9H694 974 aaKnown RBP3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 MRPL44Q9H9J2 332 aaKnown RBP3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 MED4Q9NPJ6 270 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 OCIAD1Q9NX40 245 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 MCM9Q9NXL9 1143 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 GDE1Q9NZC3 331 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 LARSQ9P2J5 1176 aaKnown RBP3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 DBF4Q9UBU7 674 aaPredicted RBP3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 ANAPC2Q9UJX6 822 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 WDR19Q8NEZ3 1342 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 TMEM94Q12767 1356 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 NID2Q14112 1375 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 ATRNO75882 1429 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 LRP5O75197 1615 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 PLCH1Q4KWH8 1693 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 RREB1Q92766 1687 aa3.08□□□□□ -1.92
CALCOCO2-216ENST00000509784 UBR2Q8IWV8 1755 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 TRBC2A0A5B9 178 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 MYMKA6NI61 221 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 E7EWF7 191 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 H0YIN7 160 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 SLC16A5O15375 505 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 SHOX2O60902 331 aaPredicted RBP3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 TADA2AO75478 443 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 GAGE7O76087 117 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 KDM4BO94953 1096 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 CLDN14O95500 239 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 HSPA4LO95757 839 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 IGKV5-2P06315 115 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 CCDC175P0C221 793 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 GAGE12FP0CL80 117 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 GAGE12GP0CL81 117 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 GAGE12IP0CL82 117 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 IGHV4-30-4P0DP06 118 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 EIF2S2P20042 333 aaKnown RBP3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 CORO1AP31146 461 aaKnown RBP3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 SYKP43405 635 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 CDH13P55290 713 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 CLDN20P56880 219 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 UBASH3AP57075 661 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 COG7P83436 770 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 GAGE1Q13065 139 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 GAGE4Q13068 117 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 MYBPHQ13203 477 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 CAMK2DQ13557 499 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 ALCAMQ13740 583 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 KARSQ15046 597 aaKnown RBP3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 OASLQ15646 514 aaKnown RBP3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 SNAPC1Q16533 368 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 HLFQ16534 295 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 SYT16Q17RD7 645 aa3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 RABL6Q3YEC7 729 aaPredicted RBP3.07□□□□□ -1.92
CALCOCO2-216ENST00000509784 KRTCAP3Q53RY4 240 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms