RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 FIGNQ5HY92 759 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 ISLR2Q6UXK2 745 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 GLT6D1Q7Z4J2 308 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 DAAM2Q86T65 1068 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 HOOK3Q86VS8 718 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 TMEM151BQ8IW70 566 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 OR52E1Q8NGJ3 308 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 NR4A3Q92570 626 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 FKBP10Q96AY3 582 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 CNDP1Q96KN2 507 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 LMF1Q96S06 567 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 MDFIQ99750 246 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 LHPPQ9H008 270 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 SPRTNQ9H040 489 aaPredicted RBP9.05□□□□□ -0.96
NEDD9-211ENST00000508546 OR52A5Q9H2C5 316 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 MVB12BQ9H7P6 319 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 WDR54Q9H977 334 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 GRPEL1Q9HAV7 217 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 MRM3Q9HC36 420 aaKnown RBP9.05□□□□□ -0.96
NEDD9-211ENST00000508546 SLC22A11Q9NSA0 550 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 SUCOQ9UBS9 1254 aaKnown RBP9.05□□□□□ -0.96
NEDD9-211ENST00000508546 FAM8A1Q9UBU6 413 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 LCMT1Q9UIC8 334 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 JMJD1CQ15652 2540 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 NBEAL1Q6ZS30 2694 aa9.05□□□□□ -0.96
NEDD9-211ENST00000508546 NSD1Q96L73 2696 aaPredicted RBP9.04□□□□□ -0.96
NEDD9-211ENST00000508546 SCN2AQ99250 2005 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 A0A087X0T9 212 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 C3orf70A6NLC5 250 aaPredicted RBP9.04□□□□□ -0.96
NEDD9-211ENST00000508546 IFRD1O00458 451 aaPredicted RBP9.04□□□□□ -0.96
NEDD9-211ENST00000508546 SOCS6O14544 535 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 APOL1O14791 398 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 STX7O15400 261 aaKnown RBP9.04□□□□□ -0.96
NEDD9-211ENST00000508546 HCRTR1O43613 425 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 BUD23O43709 281 aaKnown RBP9.04□□□□□ -0.96
NEDD9-211ENST00000508546 FAM228BP0C875 321 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 RALBP11234 206 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 COX6B1P14854 86 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 ZFXP17010 805 aaPredicted RBP9.04□□□□□ -0.96
NEDD9-211ENST00000508546 CD68P34810 354 aaPredicted RBP9.04□□□□□ -0.96
NEDD9-211ENST00000508546 CHRNA4P43681 627 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 GCGRP47871 477 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 RPA4Q13156 261 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 MFAP5Q13361 173 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 BOP1Q14137 746 aaKnown RBP9.04□□□□□ -0.96
NEDD9-211ENST00000508546 SLC9A5Q14940 896 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 PRKD1Q15139 912 aaPredicted RBP9.04□□□□□ -0.96
NEDD9-211ENST00000508546 ZIC1Q15915 447 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 INAQ16352 499 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 STX1AQ16623 288 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 SLC5A12Q1EHB4 618 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 DEFB110Q30KQ9 67 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 FILIP1LQ4L180 1135 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 ZNF658BQ4V348 819 aaPredicted RBP9.04□□□□□ -0.96
NEDD9-211ENST00000508546 MTFR2Q6P444 385 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 ALKBH5Q6P6C2 394 aaKnown RBP9.04□□□□□ -0.96
NEDD9-211ENST00000508546 SASS6Q6UVJ0 657 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 KIRREL2Q6UWL6 708 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 RPTNQ6XPR3 784 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 OVCH1Q7RTY7 1134 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 SLC25A41Q8N5S1 370 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 ZNF655Q8N720 491 aaPredicted RBP9.04□□□□□ -0.96
NEDD9-211ENST00000508546 BLOC1S5Q8TDH9 187 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.04□□□□□ -0.96
NEDD9-211ENST00000508546 NAT14Q8WUY8 206 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 SYN2Q92777 582 aaPredicted RBP9.04□□□□□ -0.96
NEDD9-211ENST00000508546 CCDC120Q96HB5 630 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 RBM41Q96IZ5 413 aaKnown RBP9.04□□□□□ -0.96
NEDD9-211ENST00000508546 VPS50Q96JG6 964 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 MRGPRX2Q96LB1 330 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 NRTNQ99748 197 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 NDC1Q9BTX1 674 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 TMUB1Q9BVT8 246 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 SLC26A1Q9H2B4 701 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 DEF6Q9H4E7 631 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 ASB8Q9H765 288 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 COG4Q9H9E3 785 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 UVRAGQ9P2Y5 699 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 HS3ST3B1Q9Y662 390 aa9.04□□□□□ -0.96
NEDD9-211ENST00000508546 FN1P02751 2386 aaKnown RBP9.04□□□□□ -0.96
NEDD9-211ENST00000508546 LRRD1A4D1F6 860 aa9.03□□□□□ -0.96
NEDD9-211ENST00000508546 TMEM200CA6NKL6 621 aa9.03□□□□□ -0.96
NEDD9-211ENST00000508546 ALOX12BO75342 701 aa9.03□□□□□ -0.96
NEDD9-211ENST00000508546 SRP72O76094 671 aaKnown RBP9.03□□□□□ -0.96
NEDD9-211ENST00000508546 PIM1P11309 404 aaPredicted RBP9.03□□□□□ -0.96
NEDD9-211ENST00000508546 ATP1B2P14415 290 aaPredicted RBP9.03□□□□□ -0.96
NEDD9-211ENST00000508546 CD1EP15812 388 aa9.03□□□□□ -0.96
NEDD9-211ENST00000508546 UGT2B7P16662 529 aa9.03□□□□□ -0.96
NEDD9-211ENST00000508546 NFKB1P19838 968 aa9.03□□□□□ -0.96
NEDD9-211ENST00000508546 CAPN3P20807 821 aa9.03□□□□□ -0.96
NEDD9-211ENST00000508546 SSTR2P30874 369 aa9.03□□□□□ -0.96
NEDD9-211ENST00000508546 SHMT2P34897 504 aa9.03□□□□□ -0.96
NEDD9-211ENST00000508546 KCNK10P57789 538 aa9.03□□□□□ -0.96
NEDD9-211ENST00000508546 TYRO3Q06418 890 aa9.03□□□□□ -0.96
NEDD9-211ENST00000508546 WASHC5Q12768 1159 aa9.03□□□□□ -0.96
NEDD9-211ENST00000508546 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.03□□□□□ -0.96
NEDD9-211ENST00000508546 TUBB8Q3ZCM7 444 aa9.03□□□□□ -0.96
NEDD9-211ENST00000508546 VWA2Q5GFL6 755 aa9.03□□□□□ -0.96
NEDD9-211ENST00000508546 XKRXQ6PP77 449 aa9.03□□□□□ -0.96
NEDD9-211ENST00000508546 NPNTQ6UXI9 565 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms