RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	DHX9	Q08211	1270 aa	Known RBP	13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	GPR19	Q15760	415 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	LONRF1	Q17RB8	773 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	BBS9	Q3SYG4	887 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	MSS51	Q4VC12	460 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	SOWAHC	Q53LP3	525 aa	Predicted RBP	13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	DNAJC21	Q5F1R6	531 aa	Known RBP	13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	TMTC4	Q5T4D3	741 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	CYB5D1	Q6P9G0	228 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	HOOK3	Q86VS8	718 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	D2HGDH	Q8N465	521 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	ZSCAN1	Q8NBB4	408 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	GALNT6	Q8NCL4	622 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	BBC3	Q96PG8	261 aa	Predicted RBP	13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	UBL7	Q96S82	380 aa	Predicted RBP	13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	KRT12	Q99456	494 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	C1GALT1	Q9NS00	363 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	FGF21	Q9NSA1	209 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	RNF14	Q9UBS8	474 aa		13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	TMEM184B	Q9Y519	407 aa	Predicted RBP	13.71	□□□□□ -0.21
CCHCR1-222	ENST00000507459	MGA	Q8IWI9	3026 aa		13.71	□□□□□ -0.22
CCHCR1-222	ENST00000507459	CACNA1G	O43497	2377 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	LOC101059948	A0A1B0GTJ6	334 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	ISM1	B1AKI9	464 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459		E5RI56	91 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459		H3BMM5	538 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	KDM1A	O60341	852 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	TIAF1	O95411	115 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	DLGAP3	O95886	979 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	S1PR4	O95977	384 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	ESR1	P03372	595 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	RPN2	P04844	631 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	CHRM5	P08912	532 aa	Predicted RBP	13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	PKM	P14618	531 aa	Known RBP	13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	ST6GAL1	P15907	406 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	PGAM1	P18669	254 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	CYP4F2	P78329	520 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	MRPS25	P82663	173 aa	Known RBP	13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	RHD	Q02161	417 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	TAF1B	Q53T94	588 aa	Predicted RBP	13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	HSP90AA5P	Q58FG0	334 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	PLEKHS1	Q5SXH7	462 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	PWWP2B	Q6NUJ5	590 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	C6orf15	Q6UXA7	325 aa	Predicted RBP	13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	SYT10	Q6XYQ8	523 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	TRIM73	Q86UV7	250 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	C2orf73	Q8N5S3	287 aa	Predicted RBP	13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	LMNTD1	Q8N9Z9	388 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	SNRNP27	Q8WVK2	155 aa	Known RBP	13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	PWWP2A	Q96N64	755 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	GPN2	Q9H9Y4	310 aa	Predicted RBP	13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	KCND1	Q9NSA2	647 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	IARS2	Q9NSE4	1012 aa	Known RBP	13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	INTS10	Q9NVR2	710 aa	Known RBP	13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	SPHK1	Q9NYA1	384 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	GALP	Q9UBC7	116 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	RUVBL2	Q9Y230	463 aa	Known RBP	13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	VPS9D1	Q9Y2B5	631 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	PCDHGA4	Q9Y5G9	962 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	NFS1	Q9Y697	457 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	FAM169A	Q9Y6X4	670 aa		13.7	□□□□□ -0.22
CCHCR1-222	ENST00000507459	EIF4E1B	A6NMX2	242 aa	Known RBP	13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	EFCAB8	A8MWE9	144 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	MAP3K7	O43318	606 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	NTRK1	P04629	796 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	ERVK-10	P10266	1014 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	UGT2B7	P16662	529 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	SLC1A2	P43004	574 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	ITGA8	P53708	1063 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	ADAR	P55265	1226 aa	Known RBP	13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	ETF1	P62495	437 aa	Known RBP	13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	TUBB4B	P68371	445 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	TUBB2A	Q13885	445 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	CRYM	Q14894	314 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	MORF4L2	Q15014	288 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	TTC23L	Q6PF05	361 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	CNST	Q6PJW8	725 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	SPESP1	Q6UW49	350 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	UNC5D	Q6UXZ4	953 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	TAX1BP1	Q86VP1	789 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	KCNMB4	Q86W47	210 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	IGDCC3	Q8IVU1	814 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	DCUN1D3	Q8IWE4	304 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	PDIK1L	Q8N165	341 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	CARF	Q8N187	725 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	ZBTB2	Q8N680	514 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	ESX1	Q8N693	406 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	CALML6	Q8TD86	181 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	KIAA1143	Q96AT1	154 aa	Predicted RBP	13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	FOPNL	Q96NB1	174 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	IL17F	Q96PD4	163 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	TRAPPC9	Q96Q05	1148 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	OR2A14	Q96R47	310 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	EBNA1BP2	Q99848	306 aa	Known RBP	13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	TUBB2B	Q9BVA1	445 aa		13.69	□□□□□ -0.22
CCHCR1-222	ENST00000507459	CCDC68	Q9H2F9	335 aa		13.69	□□□□□ -0.22

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