RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 CHMP6Q96FZ7 201 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 ZDHHC12Q96GR4 267 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 MASTLQ96GX5 879 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 ANKRD27Q96NW4 1050 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 PCDHB18PQ96TA0 734 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 TMEM79Q9BSE2 394 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 NPLQ9BXD5 320 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 PINK1Q9BXM7 581 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 NUSAP1Q9BXS6 441 aaKnown RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 GPR61Q9BZJ8 451 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 NAPBQ9H115 298 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 ST6GALNAC4Q9H4F1 302 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 SPACA1Q9HBV2 294 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 PCDH9Q9HC56 1237 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 VAT1LQ9HCJ6 419 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 WDR6Q9NNW5 1121 aaKnown RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 TLR8Q9NR97 1041 aaKnown RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 ZDHHC7Q9NXF8 308 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 GDE1Q9NZC3 331 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 OR6C2Q9NZP2 312 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 HACD3Q9P035 362 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 VPS54Q9P1Q0 977 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 COPG2Q9UBF2 871 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 XPR1Q9UBH6 696 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 MGAT4CQ9UBM8 478 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 DKK4Q9UBT3 224 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 UBQLN2Q9UHD9 624 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 GABRQQ9UN88 632 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 PLA2G4CQ9UP65 541 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 EXO1Q9UQ84 846 aaKnown RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 UBE2J1Q9Y385 318 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 MRPS2Q9Y399 296 aaKnown RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 AP4B1Q9Y6B7 739 aa3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 BZW2Q9Y6E2 419 aaKnown RBP3.54□□□□□ -1.84
HMGB3P15-201ENST00000507326 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 A0A1B0GTQ1 180 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 A0A1B0GUA9 196 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 SMIM35A0A1B0GVV1 85 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 ELOVL7A1L3X0 281 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 MFSD2BA6NFX1 497 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 PRSS29PA6NIE9 313 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 H7C4K7 107 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 XPO1O14980 1071 aaKnown RBP3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 TTI1O43156 1089 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 TGFB1I1O43294 461 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 USP12O75317 370 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 ATP6V1G1O75348 118 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 TACC1O75410 805 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 MED24O75448 989 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 DNAJB5O75953 348 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 C22orf31O95567 290 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 GNA14O95837 355 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 GAS8O95995 478 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 CSTAP01040 98 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 URODP06132 367 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 UGT2B4P06133 528 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 PGK2P07205 417 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 IGFBP1P08833 259 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 SBK2P0C263 348 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 FAM58BPP0C7Q3 252 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 MYZAPP0CAP1 466 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 ERVK-10P10266 1014 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 MYL6BP14649 208 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 CHN1P15882 459 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 ATP6V1C1P21283 382 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 ACP1P24666 158 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 PON1P27169 355 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 MARCKSP29966 332 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 CDC25CP30307 473 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 LRPAP1P30533 357 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 ICAM3P32942 547 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 RPL9P32969 192 aaKnown RBP3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 CYP2C18P33260 490 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 HTR2BP41595 481 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 ALDH3B1P43353 468 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 NR4A2P43354 598 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 ALDH7A1P49419 539 aaKnown RBP3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 ENTPD1P49961 510 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 TOB1P50616 345 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 CLCNKAP51800 687 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 PDE1AP54750 535 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 FOXG1P55316 489 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 EEFSECP57772 596 aaKnown RBP3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 SRP54P61011 504 aaKnown RBP3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 ARHGAP8P85298 464 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 SP2Q02086 613 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 LCP2Q13094 533 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 PPIL2Q13356 520 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 PTPRCAPQ14761 206 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 LARS2Q15031 903 aaKnown RBP3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 MAPRE2Q15555 327 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 UGCGQ16739 394 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 KLHL40Q2TBA0 621 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 ZNF260Q3ZCT1 412 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 CBWD6Q4V339 395 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 GPAT3Q53EU6 434 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 PLA1AQ53H76 456 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 TMEM41BQ5BJD5 291 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 CBWD3Q5JTY5 395 aa3.53□□□□□ -1.84
HMGB3P15-201ENST00000507326 PCID2Q5JVF3 399 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms