RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 SENP1Q9P0U3 644 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 PSMC3IPQ9P2W1 217 aaPredicted RBP8.24□□□□□ -1.09
PDGFC-205ENST00000506880 DNAJC16Q9Y2G8 782 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 MED16Q9Y2X0 877 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 PCDHGA8Q9Y5G5 932 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 PRSS21Q9Y6M0 314 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 RNF215Q9Y6U7 377 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 DCHS1Q96JQ0 3298 aa8.24□□□□□ -1.09
PDGFC-205ENST00000506880 AHCTF1Q8WYP5 2266 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 TMEM8BA6NDV4 472 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 OR5K3A6NET4 321 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 C2orf74A8MZ97 194 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 TARM1B6A8C7 271 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 RASGRF2O14827 1237 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 PPM1DO15297 605 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 CTIFO43310 598 aaKnown RBP8.23□□□□□ -1.09
PDGFC-205ENST00000506880 SNX2O60749 519 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 BANF1O75531 89 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 WISP3O95389 354 aaPredicted RBP8.23□□□□□ -1.09
PDGFC-205ENST00000506880 C1orf105O95561 183 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 PROS1P07225 676 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 CELA2BP08218 269 aaPredicted RBP8.23□□□□□ -1.09
PDGFC-205ENST00000506880 ADRB1P08588 477 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 RPL10P27635 214 aaKnown RBP8.23□□□□□ -1.09
PDGFC-205ENST00000506880 GSTM2P28161 218 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 CA5AP35218 305 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 MAGEA12P43365 314 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 CSRP3P50461 194 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 TERF1P54274 439 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 RAB15P59190 212 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 ABATP80404 500 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 MPP1Q00013 466 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 USP10Q14694 798 aaKnown RBP8.23□□□□□ -1.09
PDGFC-205ENST00000506880 TRADDQ15628 312 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 SLC5A12Q1EHB4 618 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 PPM1JQ5JR12 505 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 PRAMEF14Q5SWL7 426 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 ZNF648Q5T619 568 aaPredicted RBP8.23□□□□□ -1.09
PDGFC-205ENST00000506880 KCTD16Q68DU8 428 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 ARMC6Q6NXE6 501 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 GUSBP11Q6P575 273 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 ZNF549Q6P9A3 640 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 XKR5Q6UX68 686 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 FAM83HQ6ZRV2 1179 aaPredicted RBP8.23□□□□□ -1.09
PDGFC-205ENST00000506880 TBC1D1Q86TI0 1168 aaPredicted RBP8.23□□□□□ -1.09
PDGFC-205ENST00000506880 AMIGO1Q86WK6 493 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 PPM1NQ8N819 430 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 OR9A1PQ8NGU1 263 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 OR2I1PQ8NGU4 316 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 OR2L8Q8NGY9 312 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 LCN9Q8WX39 176 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 ZUFSPQ96AP4 578 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 PAFAH2Q99487 392 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 CMKLR1Q99788 373 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 STMN4Q9H169 189 aaPredicted RBP8.23□□□□□ -1.09
PDGFC-205ENST00000506880 SRMSQ9H3Y6 488 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 CNOT10Q9H9A5 744 aaKnown RBP8.23□□□□□ -1.09
PDGFC-205ENST00000506880 GPAMQ9HCL2 828 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 ARFGAP3Q9NP61 516 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 IMP3Q9NV31 184 aaKnown RBP8.23□□□□□ -1.09
PDGFC-205ENST00000506880 ARGLU1Q9NWB6 273 aaPredicted RBP8.23□□□□□ -1.09
PDGFC-205ENST00000506880 TLK1Q9UKI8 766 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 CLCA2Q9UQC9 943 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 ACOT9Q9Y305 439 aa8.23□□□□□ -1.09
PDGFC-205ENST00000506880 PCYT1BQ9Y5K3 369 aaPredicted RBP8.23□□□□□ -1.09
PDGFC-205ENST00000506880 COL27A1Q8IZC6 1860 aaPredicted RBP8.22□□□□□ -1.09
PDGFC-205ENST00000506880 CPED1A4D0V7 1026 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 B4E171 279 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 GOLGA8KD6RF30 607 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 H3BQF6 201 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 GOLGA8TH3BQL2 631 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 NIPSNAP2O75323 286 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 ACSL3O95573 720 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 RBP1P09455 135 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 PRSS56P0CW18 603 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 AMD1P17707 334 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 CD1CP29017 333 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 PBLDP30039 288 aaPredicted RBP8.22□□□□□ -1.09
PDGFC-205ENST00000506880 PKLRP30613 574 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 TSPAN7P41732 249 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 VSNL1P62760 191 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 MRPS25P82663 173 aaKnown RBP8.22□□□□□ -1.09
PDGFC-205ENST00000506880 PCDH1Q08174 1060 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 GPR18Q14330 331 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 SLC29A2Q14542 456 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 IL11RAQ14626 422 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 RTP5Q14D33 572 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 ACAP2Q15057 778 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 PLCL1Q15111 1095 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 PLA2G4EQ3MJ16 856 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 C10orf62Q5T681 223 aaPredicted RBP8.22□□□□□ -1.09
PDGFC-205ENST00000506880 CYHR1Q6ZMK1 362 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 KDM7AQ6ZMT4 941 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 LDB1Q86U70 411 aaPredicted RBP8.22□□□□□ -1.09
PDGFC-205ENST00000506880 SLITRK4Q8IW52 837 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 KLHDC8AQ8IYD2 350 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 CHCHD4Q8N4Q1 142 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 AGBL5Q8NDL9 886 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 STAG3L4Q8TBR4 150 aa8.22□□□□□ -1.09
PDGFC-205ENST00000506880 SMPDL3AQ92484 453 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms