RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 MSRAQ9UJ68 235 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 NDUFAF1Q9Y375 327 aa11.9□□□□□ -0.5
LIN54-206ENST00000506560 MANBAO00462 879 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 TRIM38O00635 465 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 ANKRD28O15084 1053 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 ANGPT2O15123 496 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 MID1O15344 667 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 LILRB5O75023 590 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 FKBP6O75344 327 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 SLC22A3O75751 556 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 PDYNP01213 254 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 PSMC3P17980 439 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 CD22P20273 847 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 GCKP35557 465 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 GPR1P46091 355 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 SLC6A12P48065 614 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 PRLHRP49683 370 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 PFN3P60673 137 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 RCAN2Q14206 197 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 GSTA3Q16772 222 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 CYP20A1Q6UW02 462 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 SUSD1Q6UWL2 747 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 ERN2Q76MJ5 926 aaKnown RBP11.9□□□□□ -0.51
LIN54-206ENST00000506560 ADGRG6Q86SQ4 1221 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 TRAPPC5Q8IUR0 188 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 SLC15A3Q8IY34 581 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 AADATQ8N5Z0 425 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 KRTCAP2Q8N6L1 136 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 ASZ1Q8WWH4 475 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 GPATCH1Q9BRR8 931 aaKnown RBP11.9□□□□□ -0.51
LIN54-206ENST00000506560 NTMT1Q9BV86 223 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 ACPTQ9BZG2 426 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 PIF1Q9H611 641 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 ATXN10Q9UBB4 475 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 NFKBIL1Q9UBC1 381 aaPredicted RBP11.9□□□□□ -0.51
LIN54-206ENST00000506560 EGFL7Q9UHF1 273 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 ANGPTL2Q9UKU9 493 aa11.9□□□□□ -0.51
LIN54-206ENST00000506560 VPS4BO75351 444 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 SH3BGRLO75368 114 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 BCAS2O75934 225 aaPredicted RBP11.89□□□□□ -0.51
LIN54-206ENST00000506560 C8GP07360 202 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 SLC6A2P23975 617 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 TAS2R38P59533 333 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 EIF4HQ15056 248 aaKnown RBP11.89□□□□□ -0.51
LIN54-206ENST00000506560 PIP5KL1Q5T9C9 394 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 AAGABQ6PD74 315 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 DOK6Q6PKX4 331 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 IZUMO2Q6UXV1 221 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 SPATA19Q7Z5L4 167 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 SPATA24Q86W54 205 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 KIAA2013Q8IYS2 634 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 CHPFQ8IZ52 775 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 KLK6Q92876 244 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 VPS35Q96QK1 796 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 LGR4Q9BXB1 951 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 RIC8BQ9NVN3 520 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 GON4LQ3T8J9 2241 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 SLC5A10A0PJK1 596 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 ULK1O75385 1050 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 FTH1P02794 183 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 HIST1H2AGP0C0S8 130 aaPredicted RBP11.89□□□□□ -0.51
LIN54-206ENST00000506560 LAMP2P13473 410 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 HIST1H2ADP20671 130 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 TIE1P35590 1138 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 POLR2JP52435 117 aaKnown RBP11.89□□□□□ -0.51
LIN54-206ENST00000506560 CDC16Q13042 620 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 SF1Q15637 639 aaKnown RBP11.89□□□□□ -0.51
LIN54-206ENST00000506560 SYTL3Q4VX76 610 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 SFT2D3Q587I9 215 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 LDLRAP1Q5SW96 308 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 KIAA1211LQ6NV74 962 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 YAF2Q8IY57 180 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 CFAP206Q8IYR0 622 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 CPA6Q8N4T0 437 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 TMEM159Q96B96 161 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 LRRC58Q96CX6 371 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 HIST1H2AHQ96KK5 128 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 OR4K3Q96R72 315 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 HIST1H2AJQ99878 128 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 H2AFJQ9BTM1 129 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 COPS7BQ9H9Q2 264 aaPredicted RBP11.89□□□□□ -0.51
LIN54-206ENST00000506560 TM7SF3Q9NS93 570 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 DZANK1Q9NVP4 752 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 KLHL42Q9P2K6 505 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 STON1Q9Y6Q2 735 aa11.89□□□□□ -0.51
LIN54-206ENST00000506560 KCNE1BA0A087WTH5 132 aa11.88□□□□□ -0.51
LIN54-206ENST00000506560 PRR23AA6NEV1 266 aa11.88□□□□□ -0.51
LIN54-206ENST00000506560 IGLON5A6NGN9 336 aa11.88□□□□□ -0.51
LIN54-206ENST00000506560 ARNTLO00327 626 aa11.88□□□□□ -0.51
LIN54-206ENST00000506560 NPC1O15118 1278 aa11.88□□□□□ -0.51
LIN54-206ENST00000506560 ATG13O75143 517 aa11.88□□□□□ -0.51
LIN54-206ENST00000506560 SLC16A8O95907 504 aa11.88□□□□□ -0.51
LIN54-206ENST00000506560 EBLN1P0CF75 366 aa11.88□□□□□ -0.51
LIN54-206ENST00000506560 MPC1LP0DKB6 136 aa11.88□□□□□ -0.51
LIN54-206ENST00000506560 ZNF8P17098 575 aaPredicted RBP11.88□□□□□ -0.51
LIN54-206ENST00000506560 ATP6V1B2P21281 511 aa11.88□□□□□ -0.51
LIN54-206ENST00000506560 TRIM25Q14258 630 aaKnown RBP11.88□□□□□ -0.51
LIN54-206ENST00000506560 NFE2L1Q14494 772 aa11.88□□□□□ -0.51
LIN54-206ENST00000506560 TLR1Q15399 786 aa11.88□□□□□ -0.51
LIN54-206ENST00000506560 ZNF658BQ4V348 819 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms