RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 OLFM1Q99784 485 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 NRSN2Q9GZP1 204 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 OR52A5Q9H2C5 316 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 STN1Q9H668 368 aaKnown RBP9.79□□□□□ -0.84
NUP54-203ENST00000504173 LATS2Q9NRM7 1088 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 IMP3Q9NV31 184 aaKnown RBP9.79□□□□□ -0.84
NUP54-203ENST00000504173 KLHL42Q9P2K6 505 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 SLC39A10Q9ULF5 831 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 PADI4Q9UM07 663 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 CDYLQ9Y232 598 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 MED16Q9Y2X0 877 aa9.79□□□□□ -0.84
NUP54-203ENST00000504173 MTO1Q9Y2Z2 717 aaKnown RBP9.79□□□□□ -0.84
NUP54-203ENST00000504173 CFAP20Q9Y6A4 193 aaKnown RBP9.79□□□□□ -0.84
NUP54-203ENST00000504173 ARID1BQ8NFD5 2236 aaPredicted RBP9.79□□□□□ -0.84
NUP54-203ENST00000504173 CPED1A4D0V7 1026 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 VIPP01282 170 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 SHBGP04278 402 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 ITGA2BP08514 1039 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 CBSLP0DN79 551 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 MTHFD1P11586 935 aaKnown RBP9.78□□□□□ -0.84
NUP54-203ENST00000504173 ENO3P13929 434 aaPredicted RBP9.78□□□□□ -0.84
NUP54-203ENST00000504173 CD9P21926 228 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 ATP5DP30049 168 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 CBSP35520 551 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 RGS4P49798 205 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 TIAL1Q01085 375 aaKnown RBP eCLIP9.78□□□□□ -0.84
NUP54-203ENST00000504173 HHEXQ03014 270 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 ABRQ12979 859 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 BMPR2Q13873 1038 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 UBAP2LQ14157 1087 aaKnown RBP9.78□□□□□ -0.84
NUP54-203ENST00000504173 KRT33BQ14525 404 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 GBX1Q14549 363 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 ZNF460Q14592 562 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 ACSBG2Q5FVE4 666 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 MROH9Q5TGP6 573 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 CAPRIN2Q6IMN6 1127 aaKnown RBP9.78□□□□□ -0.84
NUP54-203ENST00000504173 DUS1LQ6P1R4 473 aaKnown RBP9.78□□□□□ -0.84
NUP54-203ENST00000504173 PAQR3Q6TCH7 311 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 EFL1Q7Z2Z2 1120 aaKnown RBP9.78□□□□□ -0.84
NUP54-203ENST00000504173 CFAP61Q8NHU2 1237 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 DCAKDQ8WVC6 231 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 FGF11Q92914 225 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 FOPNLQ96NB1 174 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 INSM2Q96T92 566 aaPredicted RBP9.78□□□□□ -0.84
NUP54-203ENST00000504173 CAB39LQ9H9S4 337 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 POT1Q9NUX5 634 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 ZNF624Q9P2J8 865 aaPredicted RBP9.78□□□□□ -0.84
NUP54-203ENST00000504173 CPNE7Q9UBL6 633 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 FETUBQ9UGM5 382 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 SLC24A2Q9UI40 661 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 ZNF180Q9UJW8 692 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 ASF1AQ9Y294 204 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 HEBP2Q9Y5Z4 205 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 LRBAP50851 2863 aa9.78□□□□□ -0.84
NUP54-203ENST00000504173 TLN1Q9Y490 2541 aaKnown RBP9.77□□□□□ -0.85
NUP54-203ENST00000504173 LY6G6EA0A0G2JKS1 128 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 SMIM23A6NLE4 172 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 RHPN2P1A8MT19 583 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 EIF3FO00303 357 aaPredicted RBP9.77□□□□□ -0.85
NUP54-203ENST00000504173 PHGDHO43175 533 aaKnown RBP9.77□□□□□ -0.85
NUP54-203ENST00000504173 TNFSF14O43557 240 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 NUDT17P0C025 328 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 MPC1LP0DKB6 136 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 CKMT1AP12532 417 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 GLB1P16278 677 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 STMN1P16949 149 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 ZNF37AP17032 561 aaPredicted RBP9.77□□□□□ -0.85
NUP54-203ENST00000504173 CKMT2P17540 419 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 XRCC1P18887 633 aaPredicted RBP9.77□□□□□ -0.85
NUP54-203ENST00000504173 CNTFP26441 200 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 ACADLP28330 430 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 NDUFS1P28331 727 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 GCAP28676 217 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 SLC19A1P41440 591 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 SLCO1A2P46721 670 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 FASLGP48023 281 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 SERPINB8P50452 374 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 PGGT1BP53609 377 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 TMPRSS3P57727 454 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 IL2P60568 153 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 RAB10P61026 200 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 UBE2IP63279 158 aaKnown RBP9.77□□□□□ -0.85
NUP54-203ENST00000504173 IFFO1Q0D2I5 559 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 DNAJC3Q13217 504 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 LGSNQ5TDP6 509 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 LRRC8EQ6NSJ5 796 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 GUSBP11Q6P575 273 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 ADGRD1Q6QNK2 874 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 NEK10Q6ZWH5 1172 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 RAPH1Q70E73 1250 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 PIWIL4Q7Z3Z4 852 aaKnown RBP9.77□□□□□ -0.85
NUP54-203ENST00000504173 C17orf82Q86X59 251 aaPredicted RBP9.77□□□□□ -0.85
NUP54-203ENST00000504173 SPNS2Q8IVW8 549 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 OR6C4Q8NGE1 309 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 OR2W6PQ8NHA6 318 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 IFI44Q8TCB0 444 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 TFGQ92734 400 aaPredicted RBP9.77□□□□□ -0.85
NUP54-203ENST00000504173 NAT6Q93015 286 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 CCDC74AQ96AQ1 378 aa9.77□□□□□ -0.85
NUP54-203ENST00000504173 SH3KBP1Q96B97 665 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms