RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 USP17L21D6R901 530 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 USP17L18D6R9N7 530 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 USP17L22D6RA61 530 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 USP17L17D6RBQ6 530 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 USP17L19D6RCP7 530 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 USP17L20D6RJB6 530 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 H3BQ06 376 aaPredicted RBP6.15□□□□□ -1.42
CLCN3-204ENST00000504131 ITM2AO43736 263 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 NUDT21O43809 227 aaKnown RBP6.15□□□□□ -1.42
CLCN3-204ENST00000504131 GJB3O75712 270 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 OR4E1P0C645 316 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 TGM2P21980 687 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 PREPP48147 710 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 CCNG1P51959 295 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 ITGA8P53708 1063 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 TAS2R39P59534 338 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 USP17L24Q0WX57 530 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 IMPG1Q17R60 797 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 MROH9Q5TGP6 573 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF613Q6PF04 617 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 USP17L2Q6R6M4 530 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 NDUFAF7Q7L592 441 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 USP17L1Q7RTZ2 530 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 PRSS42Q7Z5A4 293 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 ANKRD46Q86W74 232 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 DDIASQ8IXT1 998 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF555Q8NEP9 628 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 SPATA22Q8NHS9 363 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 FOXRED1Q96CU9 486 aaPredicted RBP6.15□□□□□ -1.42
CLCN3-204ENST00000504131 NUDT11Q96G61 164 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 MRPL48Q96GC5 212 aaKnown RBP6.15□□□□□ -1.42
CLCN3-204ENST00000504131 SH3YL1Q96HL8 342 aaPredicted RBP6.15□□□□□ -1.42
CLCN3-204ENST00000504131 TMEM41AQ96HV5 264 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 TWNKQ96RR1 684 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 MTERF1Q99551 399 aaKnown RBP6.15□□□□□ -1.42
CLCN3-204ENST00000504131 ZNF559Q9BR84 538 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 UTP23Q9BRU9 249 aaKnown RBP6.15□□□□□ -1.42
CLCN3-204ENST00000504131 SLC22A11Q9NSA0 550 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 B4GALT4O60513 344 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 JAK2O60674 1132 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 CYP7B1O75881 506 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 VNN2O95498 520 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 TDP2O95551 362 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 EYA4O95677 639 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 ERP29P30040 261 aaKnown RBP6.15□□□□□ -1.42
CLCN3-204ENST00000504131 GGT5P36269 586 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 RIDAP52758 137 aaKnown RBP6.15□□□□□ -1.42
CLCN3-204ENST00000504131 BLOC1S1P78537 153 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 POU4F3Q15319 338 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 HIKESHIQ53FT3 197 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 RNF43Q68DV7 783 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 MFSD7Q6UXD7 560 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 DTHD1Q6ZMT9 781 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 DENND5BQ6ZUT9 1274 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 GTF2H5Q6ZYL4 71 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 SZRD1Q7Z422 152 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 IGFN1Q86VF2 1251 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 METTL25Q8N6Q8 603 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 SLC38A4Q969I6 547 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 TECTBQ96PL2 329 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 ORAI2Q96SN7 254 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 CCDC32Q9BV29 185 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 ASCL3Q9NQ33 180 aa6.15□□□□□ -1.42
CLCN3-204ENST00000504131 PDP1Q9P0J1 537 aaPredicted RBP6.15□□□□□ -1.42
CLCN3-204ENST00000504131 AK9Q5TCS8 1911 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 CIAO1O76071 339 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 CDK14O94921 469 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 FUCA1P04066 466 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 SRPRAP08240 638 aaKnown RBP6.15□□□□□ -1.43
CLCN3-204ENST00000504131 CA4P22748 312 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 TNFSF4P23510 183 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 SERPINA4P29622 427 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 FDFT1P37268 417 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 TAS2R40P59535 323 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 MRPS10P82664 201 aaKnown RBP6.15□□□□□ -1.43
CLCN3-204ENST00000504131 TNK2Q07912 1038 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 ZNF234Q14588 700 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 SPCS2Q15005 226 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 FAM214AQ32MH5 1076 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 ZNF667Q5HYK9 610 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 KIAA0930Q6ICG6 404 aaPredicted RBP6.15□□□□□ -1.43
CLCN3-204ENST00000504131 ERASQ7Z444 233 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 NOXA1Q86UR1 476 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 REPS2Q8NFH8 660 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 OR7G3Q8NG95 312 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 IFI44Q8TCB0 444 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 ADAMTS19Q8TE59 1207 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 CASKIN2Q8WXE0 1202 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 BDH2Q9BUT1 245 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 SPATA5L1Q9BVQ7 753 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 ILKAPQ9H0C8 392 aaPredicted RBP6.15□□□□□ -1.43
CLCN3-204ENST00000504131 ZNF430Q9H8G1 570 aaPredicted RBP6.15□□□□□ -1.43
CLCN3-204ENST00000504131 GLOD4Q9HC38 313 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 PDE7BQ9NP56 450 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 POLE4Q9NR33 117 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 NXF1Q9UBU9 619 aaKnown RBP6.15□□□□□ -1.43
CLCN3-204ENST00000504131 TSPAN16Q9UKR8 245 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 CLIC4Q9Y696 253 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 MROH7-TTC4A0A0A0MT08 1334 aa6.15□□□□□ -1.43
CLCN3-204ENST00000504131 AGAP5A6NIR3 686 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms