RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 GPR135Q8IZ08 494 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 SLC38A9Q8NBW4 561 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 TRIM58Q8NG06 486 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 OR5AR1Q8NGP9 310 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 OR5K2Q8NHB8 316 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 TCTN2Q96GX1 697 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 LRFN5Q96NI6 719 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 TRAPPC9Q96Q05 1148 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 HGH1Q9BTY7 390 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 CARD6Q9BX69 1037 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 ACTL8Q9H568 366 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 OR6C2Q9NZP2 312 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 PLAAQ9Y263 795 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 MAN2B2Q9Y2E5 1009 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 TCAF1Q9Y4C2 921 aa11.58□□□□□ -0.56
MED28-203ENST00000503945 ISM1B1AKI9 464 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 E7EQ34 232 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 K7EM74 188 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 CD3EAPO15446 510 aaKnown RBP11.57□□□□□ -0.56
MED28-203ENST00000503945 CEP104O60308 925 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 RPN2P04844 631 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 APOA4P06727 396 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 FURINP09958 794 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 RAB40ALP0C0E4 278 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 ST6GAL1P15907 406 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 AGXTP21549 392 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 TTPAP49638 278 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 CSE1LP55060 971 aaKnown RBP11.57□□□□□ -0.56
MED28-203ENST00000503945 SESN2P58004 480 aaPredicted RBP11.57□□□□□ -0.56
MED28-203ENST00000503945 SARNPP82979 210 aaKnown RBP11.57□□□□□ -0.56
MED28-203ENST00000503945 ACVR1Q04771 509 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 ABRQ12979 859 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 GPS2Q13227 327 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 UGT8Q16880 541 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 LACTB2Q53H82 288 aaPredicted RBP11.57□□□□□ -0.56
MED28-203ENST00000503945 DNAJC21Q5F1R6 531 aaKnown RBP11.57□□□□□ -0.56
MED28-203ENST00000503945 PRAMEF17Q5VTA0 474 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 IZUMO3Q5VZ72 239 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 TCTN3Q6NUS6 607 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 TTC23LQ6PF05 361 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 SPESP1Q6UW49 350 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 ZNF517Q6ZMY9 492 aaPredicted RBP11.57□□□□□ -0.56
MED28-203ENST00000503945 MICALCLQ6ZW33 695 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 SDCCAG8Q86SQ7 713 aaPredicted RBP11.57□□□□□ -0.56
MED28-203ENST00000503945 TEX19Q8NA77 164 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 OR1L3Q8NH93 324 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 GSDMBQ8TAX9 411 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 ZNF778Q96MU6 729 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 NRTNQ99748 197 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 DPH2Q9BQC3 489 aaPredicted RBP11.57□□□□□ -0.56
MED28-203ENST00000503945 NLNQ9BYT8 704 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 PITPNM3Q9BZ71 974 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 IL22Q9GZX6 179 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 KLHL25Q9H0H3 589 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 CHST8Q9H2A9 424 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 ACTR5Q9H9F9 607 aaPredicted RBP11.57□□□□□ -0.56
MED28-203ENST00000503945 TLK1Q9UKI8 766 aa11.57□□□□□ -0.56
MED28-203ENST00000503945 ZNF106Q9H2Y7 1883 aaKnown RBP11.57□□□□□ -0.56
MED28-203ENST00000503945 UTP20O75691 2785 aaKnown RBP11.56□□□□□ -0.56
MED28-203ENST00000503945 NBPF19A0A087WUL8 3843 aa11.56□□□□□ -0.56
MED28-203ENST00000503945 KPNA5O15131 536 aa11.56□□□□□ -0.56
MED28-203ENST00000503945 PFDN6O15212 129 aa11.56□□□□□ -0.56
MED28-203ENST00000503945 ZNF749O43361 778 aa11.56□□□□□ -0.56
MED28-203ENST00000503945 NDUFS3O75489 264 aa11.56□□□□□ -0.56
MED28-203ENST00000503945 RFPL1O75677 317 aa11.56□□□□□ -0.56
MED28-203ENST00000503945 CHRM5P08912 532 aaPredicted RBP11.56□□□□□ -0.56
MED28-203ENST00000503945 PVRP15151 417 aa11.56□□□□□ -0.56
MED28-203ENST00000503945 NR1D1P20393 614 aa11.56□□□□□ -0.56
MED28-203ENST00000503945 CCR7P32248 378 aa11.56□□□□□ -0.56
MED28-203ENST00000503945 KCNJ1P48048 391 aa11.56□□□□□ -0.56
MED28-203ENST00000503945 ITGA1P56199 1179 aa11.56□□□□□ -0.56
MED28-203ENST00000503945 BASP1P80723 227 aaKnown RBP11.56□□□□□ -0.56
MED28-203ENST00000503945 PTRHD1Q6GMV3 140 aaKnown RBP11.56□□□□□ -0.56
MED28-203ENST00000503945 ZNF534Q76KX8 674 aa11.56□□□□□ -0.56
MED28-203ENST00000503945 TMEM135Q86UB9 458 aa11.56□□□□□ -0.56
MED28-203ENST00000503945 APLFQ8IW19 511 aaPredicted RBP11.56□□□□□ -0.56
MED28-203ENST00000503945 DSELQ8IZU8 1212 aa11.56□□□□□ -0.56
MED28-203ENST00000503945 GLIS1Q8NBF1 620 aa11.56□□□□□ -0.56
MED28-203ENST00000503945 CFAP61Q8NHU2 1237 aa11.56□□□□□ -0.56
MED28-203ENST00000503945 PSMG3-AS1Q96PY0 264 aa11.56□□□□□ -0.56
MED28-203ENST00000503945 OR2A14Q96R47 310 aa11.56□□□□□ -0.56
MED28-203ENST00000503945 AP1M1Q9BXS5 423 aa11.56□□□□□ -0.56
MED28-203ENST00000503945 EIF2B3Q9NR50 452 aaKnown RBP11.56□□□□□ -0.56
MED28-203ENST00000503945 CATSPERZQ9NTU4 200 aa11.56□□□□□ -0.56
MED28-203ENST00000503945 SNX7Q9UNH6 387 aa11.56□□□□□ -0.56
MED28-203ENST00000503945 ICKQ9UPZ9 632 aa11.56□□□□□ -0.56
MED28-203ENST00000503945 AP1M2Q9Y6Q5 423 aa11.56□□□□□ -0.56
MED28-203ENST00000503945 TNRC6AQ8NDV7 1962 aaKnown RBP11.56□□□□□ -0.56
MED28-203ENST00000503945 IQCF5A8MTL0 148 aa11.55□□□□□ -0.56
MED28-203ENST00000503945 PRMT5O14744 637 aaPredicted RBP11.55□□□□□ -0.56
MED28-203ENST00000503945 GPC4O75487 556 aa11.55□□□□□ -0.56
MED28-203ENST00000503945 OR2B3O76000 313 aa11.55□□□□□ -0.56
MED28-203ENST00000503945 SLCO2B1O94956 709 aa11.55□□□□□ -0.56
MED28-203ENST00000503945 CD63P08962 238 aa11.55□□□□□ -0.56
MED28-203ENST00000503945 UGT2B7P16662 529 aa11.55□□□□□ -0.56
MED28-203ENST00000503945 CXCR5P32302 372 aa11.55□□□□□ -0.56
MED28-203ENST00000503945 CCL11P51671 97 aa11.55□□□□□ -0.56
MED28-203ENST00000503945 PMS2P54278 862 aa11.55□□□□□ -0.56
MED28-203ENST00000503945 RPS18P62269 152 aaKnown RBP11.55□□□□□ -0.56
MED28-203ENST00000503945 CDK16Q00536 496 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms