RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 CHRNA7P36544 502 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 MAGEA11P43364 429 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 STAT2P52630 851 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 PNLIPRP2P54317 469 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 HERV-K104P61576 105 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 CXCL9Q07325 125 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 PNRC1Q12796 327 aaPredicted RBP2.2□□□□□ -2.06
SMAD1-203ENST00000502342 WTAPQ15007 396 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 KRT71Q3SY84 523 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 C20orf194Q5TEA3 1177 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 TRIM65Q6PJ69 517 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 LINGO4Q6UY18 593 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 Q6ZSR9 355 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 TMPRSS11FQ6ZWK6 438 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 PIGZQ86VD9 579 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 TMEM173Q86WV6 379 aaPredicted RBP2.2□□□□□ -2.06
SMAD1-203ENST00000502342 EID3Q8N140 333 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 SCML4Q8N228 414 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 AFAP1Q8N556 730 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 MAPKAPK5-AS1Q8N8E1 139 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 NIPA2Q8N8Q9 360 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 PAPD5Q8NDF8 572 aaKnown RBP2.2□□□□□ -2.06
SMAD1-203ENST00000502342 OR13J1Q8NGT2 312 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 OR4C3Q8NH37 302 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 FGFBP3Q8TAT2 258 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 IRGQQ8WZA9 623 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 TAF15Q92804 592 aaKnown RBP eCLIP2.2□□□□□ -2.06
SMAD1-203ENST00000502342 AGAP3Q96P47 875 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 TREX2Q9BQ50 279 aaPredicted RBP2.2□□□□□ -2.06
SMAD1-203ENST00000502342 SYT11Q9BT88 431 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 URM1Q9BTM9 101 aaKnown RBP2.2□□□□□ -2.06
SMAD1-203ENST00000502342 MCRIP2Q9BUT9 160 aaKnown RBP2.2□□□□□ -2.06
SMAD1-203ENST00000502342 NUP85Q9BW27 656 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 PITPNM3Q9BZ71 974 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 LAT2Q9GZY6 243 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 MMP27Q9H306 513 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 OPA3Q9H6K4 179 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 TBC1D17Q9HA65 648 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 SDR39U1Q9NRG7 319 aaPredicted RBP2.2□□□□□ -2.06
SMAD1-203ENST00000502342 BLOC1S4Q9NUP1 217 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 B3GAT1Q9P2W7 334 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 CACNG4Q9UBN1 327 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 VPS28Q9UK41 221 aa2.2□□□□□ -2.06
SMAD1-203ENST00000502342 ANKRD18BA2A2Z9 1011 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 ANKUB1A6NFN9 424 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 A8MV72 311 aaPredicted RBP2.19□□□□□ -2.06
SMAD1-203ENST00000502342 E9PQ18 207 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 KLF11O14901 512 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 ADAMDEC1O15204 470 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 CREG1O75629 220 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 GJB3O75712 270 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 CSH1P0DML2 217 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 CSH2P0DML3 217 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 DNASE1P24855 282 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 ACSL1P33121 698 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 HOXD13P35453 343 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 RPL21P46778 160 aaKnown RBP2.19□□□□□ -2.06
SMAD1-203ENST00000502342 RXRGP48443 463 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 B3GALT5-AS1P59052 145 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 PSMC6P62333 389 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 SQLEQ14534 574 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 E2F5Q15329 346 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 NTRK2Q16620 822 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 C15orf59Q2T9L4 293 aaPredicted RBP2.19□□□□□ -2.06
SMAD1-203ENST00000502342 KLHL26Q53HC5 615 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 KRT79Q5XKE5 535 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 FAM205BPQ63HN1 556 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 FAAP20Q6NZ36 180 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 TEX38Q6PEX7 206 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 PSRC1Q6PGN9 363 aaPredicted RBP2.19□□□□□ -2.06
SMAD1-203ENST00000502342 GTSCR1Q86UQ5 136 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 KBTBD6Q86V97 674 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 CEP57Q86XR8 500 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 LSMEM2Q8N112 164 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 ARHGAP24Q8N264 748 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 ZNF614Q8N883 585 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 TRIML1Q8N9V2 468 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 MAPK1IP1LQ8NDC0 245 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 OR2T11Q8NH01 316 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 EXD1Q8NHP7 514 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 CCDC107Q8WV48 283 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 ZNF689Q96CS4 500 aaPredicted RBP2.19□□□□□ -2.06
SMAD1-203ENST00000502342 RSRC1Q96IZ7 334 aaKnown RBP2.19□□□□□ -2.06
SMAD1-203ENST00000502342 ATOH8Q96SQ7 321 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 VGLL1Q99990 258 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 BTBD10Q9BSF8 475 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 FUCA2Q9BTY2 467 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 CLEC7AQ9BXN2 247 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 TEX12Q9BXU0 123 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 DGCR6LQ9BY27 220 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 PPANQ9NQ55 473 aaKnown RBP2.19□□□□□ -2.06
SMAD1-203ENST00000502342 TBC1D22BQ9NU19 505 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 PAK5Q9P286 719 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 TBC1D29Q9UFV1 150 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 TUBE1Q9UJT0 475 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 MTUS1Q9ULD2 1270 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 MMP24Q9Y5R2 645 aa2.19□□□□□ -2.06
SMAD1-203ENST00000502342 CACNA1FO60840 1977 aa2.18□□□□□ -2.06
SMAD1-203ENST00000502342 GPR75-ASB3A0A0A6YYF3 556 aa2.18□□□□□ -2.06
SMAD1-203ENST00000502342 AGAP14A8MT82 685 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms