RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 AMDHD2Q9Y303 409 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 HYOU1Q9Y4L1 999 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 LTBP4Q8N2S1 1624 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 MYH10P35580 1976 aa4.71□□□□□ -1.66
SSR3-209ENST00000498205 LOXHD1Q8IVV2 1947 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 BTAF1O14981 1849 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 SMCO2A6NFE2 343 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 HNRNPCL2B2RXH8 293 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 H3BQF6 201 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 MID1O15344 667 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 PAGE4O60829 102 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 PRDM1O75626 825 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 SEC31AO94979 1220 aaKnown RBP4.7□□□□□ -1.66
SSR3-209ENST00000498205 SERPING1P05155 500 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 F7P08709 466 aaPredicted RBP4.7□□□□□ -1.66
SSR3-209ENST00000498205 KRT10P13645 584 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 CDH2P19022 906 aaPredicted RBP4.7□□□□□ -1.66
SSR3-209ENST00000498205 CCT6AP40227 531 aaKnown RBP4.7□□□□□ -1.66
SSR3-209ENST00000498205 MAGEA9P43362 315 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 HARS2P49590 506 aaKnown RBP4.7□□□□□ -1.66
SSR3-209ENST00000498205 MMP14P50281 582 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 MRPL12P52815 198 aaKnown RBP4.7□□□□□ -1.66
SSR3-209ENST00000498205 NAPAP54920 295 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 OLR1P78380 273 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 FOXM1Q08050 763 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 GRIK2Q13002 908 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 STK4Q13043 487 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 DCTN2Q13561 401 aaKnown RBP4.7□□□□□ -1.66
SSR3-209ENST00000498205 CDC37Q16543 378 aaPredicted RBP4.7□□□□□ -1.66
SSR3-209ENST00000498205 ACCSLQ4AC99 568 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 CFAP221Q4G0U5 840 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 KRT79Q5XKE5 535 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 HAUS3Q68CZ6 603 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 WDR73Q6P4I2 378 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 TSSK4Q6SA08 328 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 DSTYKQ6XUX3 929 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 PQLC2Q6ZP29 291 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 QSOX2Q6ZRP7 698 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 KIAA1328Q86T90 577 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 NBPF5PQ86XG9 351 aaPredicted RBP4.7□□□□□ -1.66
SSR3-209ENST00000498205 CHERPQ8IWX8 916 aaKnown RBP4.7□□□□□ -1.66
SSR3-209ENST00000498205 EFCAB13Q8IY85 973 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 RBMXL3Q8N7X1 1067 aaKnown RBP4.7□□□□□ -1.66
SSR3-209ENST00000498205 NOA1Q8NC60 698 aaKnown RBP4.7□□□□□ -1.66
SSR3-209ENST00000498205 KIAA0895Q8NCT3 520 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 SPATA4Q8NEY3 305 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 PPHLN1Q8NEY8 458 aaKnown RBP4.7□□□□□ -1.66
SSR3-209ENST00000498205 LNX1Q8TBB1 728 aaPredicted RBP4.7□□□□□ -1.66
SSR3-209ENST00000498205 AFAP1L1Q8TED9 768 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 SECTM1Q8WVN6 248 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 CRYGNQ8WXF5 182 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 FIG4Q92562 907 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 RAD54LQ92698 747 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 PABPC5Q96DU9 382 aaKnown RBP4.7□□□□□ -1.66
SSR3-209ENST00000498205 TMEM19Q96HH6 336 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 CHP1Q99653 195 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 CRACR2AQ9BSW2 395 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 FKRPQ9H9S5 495 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 KCNMB3Q9NPA1 279 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 LTB4R2Q9NPC1 389 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 PLSCR4Q9NRQ2 329 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 IRAK4Q9NWZ3 460 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 C1RLQ9NZP8 487 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 LRWD1Q9UFC0 647 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 GUCA1BQ9UMX6 200 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 TRAF3IP3Q9Y228 551 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 UBE4BO95155 1302 aa4.7□□□□□ -1.66
SSR3-209ENST00000498205 A0A0G2JPF8 293 aa4.69□□□□□ -1.66
SSR3-209ENST00000498205 NPIPB15A6NHN6 443 aaPredicted RBP4.69□□□□□ -1.66
SSR3-209ENST00000498205 LRRIQ3A6PVS8 624 aaPredicted RBP4.69□□□□□ -1.66
SSR3-209ENST00000498205 HNRNPCL3B7ZW38 293 aa4.69□□□□□ -1.66
SSR3-209ENST00000498205 CCDC188H7C350 402 aa4.69□□□□□ -1.66
SSR3-209ENST00000498205 SNAP23O00161 211 aa4.69□□□□□ -1.66
SSR3-209ENST00000498205 PDXKO00764 312 aa4.69□□□□□ -1.66
SSR3-209ENST00000498205 BUB3O43684 328 aa4.69□□□□□ -1.66
SSR3-209ENST00000498205 HNRNPCL1O60812 293 aaKnown RBP4.69□□□□□ -1.66
SSR3-209ENST00000498205 ATP1A1P05023 1023 aaKnown RBP4.69□□□□□ -1.66
SSR3-209ENST00000498205 CLEC3BP05452 202 aa4.69□□□□□ -1.66
SSR3-209ENST00000498205 CYC1P08574 325 aa4.69□□□□□ -1.66
SSR3-209ENST00000498205 HNRNPCL4P0DMR1 293 aa4.69□□□□□ -1.66
SSR3-209ENST00000498205 PDHBP11177 359 aa4.69□□□□□ -1.66
SSR3-209ENST00000498205 G6PDP11413 515 aa4.69□□□□□ -1.66
SSR3-209ENST00000498205 CAPN2P17655 700 aa4.69□□□□□ -1.66
SSR3-209ENST00000498205 BDKRB2P30411 391 aa4.69□□□□□ -1.66
SSR3-209ENST00000498205 EIF2S3P41091 472 aaKnown RBP4.69□□□□□ -1.66
SSR3-209ENST00000498205 MTIF2P46199 727 aaKnown RBP4.69□□□□□ -1.66
SSR3-209ENST00000498205 CCR9P51686 369 aa4.69□□□□□ -1.66
SSR3-209ENST00000498205 HSPA2P54652 639 aa4.69□□□□□ -1.66
SSR3-209ENST00000498205 HADHBP55084 474 aaKnown RBP4.69□□□□□ -1.66
SSR3-209ENST00000498205 EEF1A1P68104 462 aaKnown RBP4.69□□□□□ -1.66
SSR3-209ENST00000498205 CSNK2A1P68400 391 aaPredicted RBP4.69□□□□□ -1.66
SSR3-209ENST00000498205 ASIC1P78348 528 aa4.69□□□□□ -1.66
SSR3-209ENST00000498205 ENPEPQ07075 957 aa4.69□□□□□ -1.66
SSR3-209ENST00000498205 CSTF3Q12996 717 aaKnown RBP4.69□□□□□ -1.66
SSR3-209ENST00000498205 DRP2Q13474 957 aa4.69□□□□□ -1.66
SSR3-209ENST00000498205 CUL1Q13616 776 aa4.69□□□□□ -1.66
SSR3-209ENST00000498205 KRT81Q14533 505 aa4.69□□□□□ -1.66
SSR3-209ENST00000498205 NAB2Q15742 525 aa4.69□□□□□ -1.66
SSR3-209ENST00000498205 DNAJC21Q5F1R6 531 aaKnown RBP4.69□□□□□ -1.66
SSR3-209ENST00000498205 KCNT1Q5JUK3 1230 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms